Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0556 ATGATTTGTTGCTTCTTGCTCGTTTTCTATTTGGGGATTTTGGAAGTGGGCATGGTGGGTAAAGACGATGCTCGAAAAATGTTCTGGCGGTCGGCCTCTTGGTCGGCGTCTCGCTCCGCCGCACACAATCCGGATGGCGACGGAAAGGACTTCGTAGATCCGGATGGGAGTGTTGGTAATATCAACGGGGAAACTCGTAGGTATCCTCCCGCTCCGCTAACCCCTCGATCGCAGCAAAATTGCAAGGCACGATCTTTTTTGCCCCCGTTACAGCCGCTTTCAATTGCTCGGAGGAGCTTGGATGAGTGGCCGAAAGCGAGTTCTGATGATATCGGGGAGTGGCCTCATCCCCCAACTCCTAGTGGAAGAGGTAATGGAGAGAGGTTGAAGCTTGATTTATCTTCTACTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAAAGAGATAAGATTGCATACTTTGATAAAGAATGCTCAAAAGTGGCGGAACATATTTATCTTGGAGGAGACGCTGTTGCTAGGGATAGGGATATATTGAAGCAAAATGGGATTACTCATATTTTGAATTGTGTGGGCTTTGTTTGTCCTGAGTACTTCAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAGGATAGTCCAACGGAAGATATTACTAGTATTCTAATAGAAAATGGCAAATCAGCCAGAAATATTTCTCCTGGTAAGAGGAGAGCGGACTCATATAATGTTGATTTTGAAGTTTTCGAGAAAGCTATCATGGGAGGTTTTGTGCCTCCATTTGCTTCAGCAGAGGATGAACTTGAAACCCACCTTCCTGCTAGGGAGAGCTACTGGAGTGTGTTAAGACGTAAGTTTGCCTCTGCCAACATGAAGGAATTTGTCTCAGAGCCTAAATTATCATATTCAAGGGTTTATTCGGATTCGGGGTCAAGTACTCATTCATCGGTAAAGTCATCTCCATTATCATCACTGTCAACAACTACATCTTCTTCTTCTTCATCCCCTTATCTCTCACCAGATTCCATTACTTCTGATTCAAGCAATAGTTCAAAGTGTTCCGAAACATCTCTTGATTCTCCTTATGCAGCTTTGACTTCTACGCCAGCATCCTCTTCTTTATCTAACTTTTCTAACTTGTCCCTCCTTTCATCTAGTTCTTCTCAACCAGTAACAGAAGGTGCGGAAACTTGTGTCAAGTTGGCATCACAGCCCTGTCATCAGTCAGCTTCCTTGATTTTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGGGGCAGTCTGTCAAAGTCTTTGAAGTTACCACTGATGCATGATAAAACACTGGTAATGAATAGATCATCAACTTTTAACGCTACTCGAGAAGATGGTGCTGTTATGAATGGCATCACTAGCCATTTGCATCAATCAGATAGTTTAGAAAATTCATCTGATGTAAACAACCATGTCAAAGGTAGAGGTTTGGATTCAACTCAGTTGTGCGAGGTATTATTATGTCCAGGTGCTGCAGATAGTGTTGACTACGGCAAAGCTTCATTTGTTGGAAACTGTAGTCACTCTTGGGTGAGAAGCTCTTCAAGGGAAGACATAAAGTCTACATCAAATGGAATGGATGGAAGTGGTCTCCTACAATCTAATAAACAAAATTTAGTTTATCACTGGCCCAGCTTAGAGAAGATTGTGACATTTGGTGCTAGTCATTTGGATTCTAAAGCTGCTTTTGTTATTTTCTCTTCAAGTACAATTTCTGGTAAACATGCAAGAAACATTTTATATTTTTGGCTGGGAAGTTCTTTCAGCTGCGCTGCATCTCAGGTTCGATTAGATCATAACAGAGAGATAGATTGTCAAGGAGGAGTTGACTGGAATCAAGTTGGTTGTGATATCCTTGCTCATTTTGGTTTGCCAAATGACACTATCATCAAGGACATCCAGAGGATGGTTCATTATTTGTTTCTTGTGGGCATTTATTTCCTGTCTCTTTTTAGTGATAATATCGTGGATGTTTTGGTATCTAGACAGGATGCAAGATTAGATTGGCTGGATCTCATTCTTAAAACTGCTTTGTTATATGCTTGCTTGCAGGATGCTGTGAAATTCATCGTAGCTCAGCTGATTGTACAGTGCTTTTAA 2136 0.4185 MICCFLLVFYLGILEVGMVGKDDARKMFWRSASWSASRSAAHNPDGDGKDFVDPDGSVGNINGETRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWPHPPTPSGRGNGERLKLDLSSTQRNPDKNAGLVKRDKIAYFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPTEDITSILIENGKSARNISPGKRRADSYNVDFEVFEKAIMGGFVPPFASAEDELETHLPARESYWSVLRRKFASANMKEFVSEPKLSYSRVYSDSGSSTHSSVKSSPLSSLSTTTSSSSSSPYLSPDSITSDSSNSSKCSETSLDSPYAALTSTPASSSLSNFSNLSLLSSSSSQPVTEGAETCVKLASQPCHQSASLILKKPSTSLAERRGSLSKSLKLPLMHDKTLVMNRSSTFNATREDGAVMNGITSHLHQSDSLENSSDVNNHVKGRGLDSTQLCEVLLCPGAADSVDYGKASFVGNCSHSWVRSSSREDIKSTSNGMDGSGLLQSNKQNLVYHWPSLEKIVTFGASHLDSKAAFVIFSSSTISGKHARNILYFWLGSSFSCAASQVRLDHNREIDCQGGVDWNQVGCDILAHFGLPNDTIIKDIQRMVHYLFLVGIYFLSLFSDNIVDVLVSRQDARLDWLDLILKTALLYACLQDAVKFIVAQLIVQCF 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0556 711 PANTHER MKPA PROTEIN 23 224 - -
Lele47g0556 711 CDD DSP 159 223 - -
Lele47g0556 711 MobiDBLite consensus disorder prediction 62 82 - -
Lele47g0556 711 Gene3D Protein tyrosine phosphatase superfamily 134 228 IPR029021 -
Lele47g0556 711 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 150 224 IPR029021 -
Lele47g0556 711 MobiDBLite consensus disorder prediction 311 353 - -
Lele47g0556 711 MobiDBLite consensus disorder prediction 106 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0556 Lele-ChrLele47 5009907 5015829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0556 18 194 Protein tyrosine phosphatase (PTP) family AT3G55270 66.489 2.08e-75 257