Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0541 ATGTGGGCATGCTTTCATAAGTCTTTCCAGCATAAAAGCTTTTGGATGCTGCGGGATGCAGGATGCCTAGCTGATGAAAATATGGGATATGAGAATTCTTCCAGAATTGAACCAAAGCGTGGTCATCAATGGTTTGTGGAAACAGGTGAACCAGAAATTATCAGCAACAATAAGAAGCAAGCTGTTGAAGCTGTTGGTGGCAAGCCAGTTTCAGGGGCTTCACATTTGGATGTATCTCCTTGGGACCACAATTCTGGGTTTCACACAGTTACAGGTCAATTTTCTGACCGTCTTTTTGGATCTGAGCCTGTAAGGACTTTCAATTTGGTTGATAAGAACATGCCATCAATGGGAAGTGGAAATCTGAATATGGGAAGGAAGGATTTTGAGAACAACTATGGAAATGATCCATCAGTGGGGCTGTCAATGTCTCATACTATCGAGGACCCTTTATCTTGTATCAATTTCGGTGGTATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATACTAACAATTACATGTCTGCATCTATGGGGCACTCCTATAGTAGGGCAGATAATAATGCAATTTCGATGGTTGCTGACTACAATAAGAATGATAGTAATATATCATTAGGTCAGACTTACAACAGCGTAAATGAGAATATCATCTCTGGGGGTACTGCAATAACGAGGGCTGATGACAATCTTGGTTCAATGGGTCATGAATTCAATAAAGATGGAAACTTTTTGATGATGGGCCACACTTATGGCAAGGGAGATGAAAGCGTCTTATCAATGGGTCAGCCCTTTGACAGGGGAGATGGAAATTTCATATCAATAGGTCAGTCATATGAAAAGGAAGATGGCAATTTGATATCACTGGGCAACTCATATAACAAGGGGCATGAAAACTGCATGCCAATGGGCCCGAGCTACAGTAAATCAGGAGAAAATTTCATTTCAATTGCTCCTTCCTATGACAAGGGAATTGATCATATCATGCCAGTGGGGCCTACATTTGACAAGGTGGATTCAAACATGGTATCAACAAACCCTTCATATGATAAAGGAGATTCCAACTCTTTGACGGTGGGTCACAACTATAATAAGAATGAGGGCTGTACCATAACTTTTGGGGGCTTTAATGATGATCCAGAGCCAAATCCCTCAGGTGGGATCATTAGTGGCTATGATCTGTTGATGGGCAACCAGAACTCAGCTCATGGTTTGGATGGCCAGAAGGATCTAGTTGACTCAAACCCTGAACTGGTTGTAAATAGCAATCCAAAATCTAATTCTAAAACTGATAATGTCATTAAGAGTAAGGAACCGAAGGCAAGGAAGGTTCCTTCCAATAACTTCCCTTCAAATGTCAAAAGTCTGTTATCAACTGGAATTTTCGATGGTGTTCCTGTAAAGTATGTTTCTTGGTCACGGGAGAAACATCTTAAAGGAGTTATAAAAGGGACAGGGTATTTGTGCTCCTGTAATGAATGCAAGGAGTCCAAGGCTCTTAACGCATACGAGTTTGAGCGTCATGCGGGTGCCAAGACCAAGCACCCAAACAATCACATTTACTTTGAGAATGGGAAAACCATCTATGCTGCTGTTCAAGAGCTGAAGAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAACTGTTACTGGATCTACCATCAACCAAAAGAATTTCCGAGTCTGGAAAGCTTCATACCAAGCTGCTACTCGGGAACTTCAACGCATATATGGAAAAGATGAAGTGGTCATCCCAACTTAA 1761 0.4123 MWACFHKSFQHKSFWMLRDAGCLADENMGYENSSRIEPKRGHQWFVETGEPEIISNNKKQAVEAVGGKPVSGASHLDVSPWDHNSGFHTVTGQFSDRLFGSEPVRTFNLVDKNMPSMGSGNLNMGRKDFENNYGNDPSVGLSMSHTIEDPLSCINFGGIRKVKVNQVRDTNNYMSASMGHSYSRADNNAISMVADYNKNDSNISLGQTYNSVNENIISGGTAITRADDNLGSMGHEFNKDGNFLMMGHTYGKGDESVLSMGQPFDRGDGNFISIGQSYEKEDGNLISLGNSYNKGHENCMPMGPSYSKSGENFISIAPSYDKGIDHIMPVGPTFDKVDSNMVSTNPSYDKGDSNSLTVGHNYNKNEGCTITFGGFNDDPEPNPSGGIISGYDLLMGNQNSAHGLDGQKDLVDSNPELVVNSNPKSNSKTDNVIKSKEPKARKVPSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKHLKGVIKGTGYLCSCNECKESKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAAVQELKNTPQEMLFDAIQTVTGSTINQKNFRVWKASYQAATRELQRIYGKDEVVIPT 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0541 586 Pfam Tify domain binding domain 479 533 IPR032308 -
Lele47g0541 586 MobiDBLite consensus disorder prediction 417 446 - -
Lele47g0541 586 PANTHER AUTOIMMUNE REGULATOR 14 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0541 Lele-ChrLele47 4622664 4629885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0541 441 567 PHD Transcription Factor Family AT3G53680 54.331 3.60e-40 154