Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0529 ATGGTCTTCTCTTCCATTCCAGTCTATCATTTTGATCCACCACCACCCAACTGGCCTCACCAGCAGCAGCCAGAAGGAGTCCCGATTCATGCCCAGAATTCCCAGGTTCCGCCTCCTCCTCCTCCGCCTCCACGGCCGCAGGTTGCTGATGCTAGTGGTGGTGACAAAGGCTCGACGAGGCCGGGATCCATGGCGGATCGAGCTCGGTTAGGAAAGATGGCACAGCCAGAAGCAGCTGTTAAATGTCCAAGGTGTGAATCAACCAACACCAAGTTCTGTTACTACAACAATTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCAAGGCGGCGCGTTGAGGAACGTCCCGGTGGGAGGAGGTTGCAGAAGGAAGAACAAAAGAAGCAAAGTAACTAACAACAGCAAATCATCAAAATCTCCGAACAAAGCAGCATCAGGTTCTATTATTTGCAACAATTCCTCAAGTAATAACTGTTGCCCTAGTATTGATCATCATCATCACTTGATAGGTCATCACTTACCATCTCCATTACTCTTCCCTCATCCGACTACTACATCTCATAGTTACAGTGACTACGACGTGGTTTTTGGGGCAACAAACCTCAATCATGATCCTGAATTTCAAATTGGTTGTAGTAATTCTACTAATAACAACAATGGGTTTATTACTACTACTGAGCAATGGAAGCTACCAAGTCTTCTGCAGCATCATCAACAGTTTCCAGCAACATTCTTGAGTCATCTTGAGGCACCGCCGGTAGGGTTATATCAGTTTCAAAGATCAGAAAATGTTGGGATCGAGCCTTCAACGCCACTATTATATTCTGGTGCTAGTGATCATCATCGTCAGCTTACCGCTAATACAGTCAAAAAGGAGGAAAATATGGATCAAGTTGTGGGTTTATCCAAGAGTCTTACGGGTAAGTCAGAAAATAATAATAATGAGCAATTCTGGGAATTAGCAAATAATGGCGGCAGCGCATGGAATATCAATAATAATGTTTCTATTAGTTTCGCTTCTTCTTCCTCCATCACCCATCTCTTGTGA 1071 0.4528 MVFSSIPVYHFDPPPPNWPHQQQPEGVPIHAQNSQVPPPPPPPPRPQVADASGGDKGSTRPGSMADRARLGKMAQPEAAVKCPRCESTNTKFCYYNNYSLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRKNKRSKVTNNSKSSKSPNKAASGSIICNNSSSNNCCPSIDHHHHLIGHHLPSPLLFPHPTTTSHSYSDYDVVFGATNLNHDPEFQIGCSNSTNNNNGFITTTEQWKLPSLLQHHQQFPATFLSHLEAPPVGLYQFQRSENVGIEPSTPLLYSGASDHHRQLTANTVKKEENMDQVVGLSKSLTGKSENNNNEQFWELANNGGSAWNINNNVSISFASSSSITHLL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0529 356 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Lele47g0529 356 MobiDBLite consensus disorder prediction 124 153 - -
Lele47g0529 356 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 264 IPR045174 GO:0003700|GO:0006355
Lele47g0529 356 MobiDBLite consensus disorder prediction 33 48 - -
Lele47g0529 356 MobiDBLite consensus disorder prediction 12 73 - -
Lele47g0529 356 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Lele47g0529 356 Pfam Dof domain, zinc finger 79 134 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0529 Lele-ChrLele47 4462574 4463859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0529 60 137 C2C2-Dof Transcription Factor Family AT2G37590 82.051 1.44e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele47g0529 zf-Dof 1.8e-32 No_clan