Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0516 ATGGGGACGAGTTCAGTCAATGAAAAGATCATAACAATGAAAGAAGTCGAAGTAGAAATTATTTCCAAAGAAGACATCAATCCTTCCAGTCCAACACCTTCCCACCTAGGAATCTTCAAATTCTGTCTCTTGGATCATCTCATTCCTGCTCCTTATTCTCCAATCATCTTCTTCTATCCCTCATCATTATCATCACTTACCCTCTTTGGAGAAAACCCTAATAGCCTTCACCTTCTGAAGCAGTCTCTATCAGACACACTAACCCTATTTTACCCTCTCGCCGGAAAAATCAAAGACGACCTATCCATTTTCTGTAACGATGAAGGAGCCAACTTCATTGAAGCTAAAGTCAAGTGCGCTCTTTCTGAATTCCTCACCCACCCTGACCTTATCTCACTTCATAAACTTCTTCCTTGTGACCTTAAAGTTCCAAAAGAATCATACGTTGGAACTTATGTCTGTAACATTCAAGTGAATGTGTTTGATTGTGGTGGAATCTCTATTGGTTTGTGTATTTCACATAGGATTCTTGATGGAGCTTCATTGAGTAGTTTTCTCAAAACATGGACGAGTAAGGCTACTGATAATAACAAGGAAGTTGTAAAACCAGAGATATTAATGGCGTCTTCGTTGTTTCCAATGAATAGTGATGATGAAGAAGATGATGGTTTGTGGCTTAGAGACTCGTCCATGGCTATGTGGGGTTCGATGTTTAAGAAAGGAAAGTTTGTTACGAGAAGGTTCTGGTTCAGTAATTCTGCCATAGCCAAGCTCAAGCTCCAAATGGTTAATTGTTCTTCTTCAGATATGGTGAAAAATCCTACGCGTTTGGAGATTGTTTCTGCAATTTTGTGGAAGTCTTTCATGGATGCGTCCAAAGCACAAGCTGATGGCTGCAACAACAGTAGCCAATTAAAAAGGCCTTGTTTGGTGAGTCACCTGGTGAACTTGCGAAGAAGAATAAAAGACAAAAACGACAACGACCTGTGTCGTTCTGCAGAAAACGCCATTGGAAATCTTCTCTGGTTAGCTTTTGCAAAGTCCAACATTATTATGGCAGACAACAACAATAATCACGAGACAAGATTAGATGGGTTGGTGAAGAAACTAAGAAAAGCATTATCCACAATAAACGATAAGTTCATTGACAACATGCGAACTACTAATAACTTTACTAGGAAGTCAACAATGCTCAAGTCTCTGAACATCAAATCAATAATGAAAGGCGATGAAGAAGCAGAAGAAGTTGACAGTTTAGGGTTTACCAGTTGGTGCAATTTAGGGTTCTATGAGGTTGACTTTGGTTGGGGCAAGCCCATATGGGTTAGTAGCATTGGTTCGTGTGATTCTGTGTTTATGAACCTTGTCGTTTTGGTGGATTCAAGGTTTGGTGATGGAATTGAAGCTTGGATTACCTTGGATGAACCATTCATGGCTCATTTGGAAACAAACCCTGAGCTTCTTGGTTTTGCTATGTTGGATCCAAATCCTTTAGCAAGCCCGGGTCTCGGGTCTCAGGCTTTGTGTAAGATTTGA 1536 0.4023 MGTSSVNEKIITMKEVEVEIISKEDINPSSPTPSHLGIFKFCLLDHLIPAPYSPIIFFYPSSLSSLTLFGENPNSLHLLKQSLSDTLTLFYPLAGKIKDDLSIFCNDEGANFIEAKVKCALSEFLTHPDLISLHKLLPCDLKVPKESYVGTYVCNIQVNVFDCGGISIGLCISHRILDGASLSSFLKTWTSKATDNNKEVVKPEILMASSLFPMNSDDEEDDGLWLRDSSMAMWGSMFKKGKFVTRRFWFSNSAIAKLKLQMVNCSSSDMVKNPTRLEIVSAILWKSFMDASKAQADGCNNSSQLKRPCLVSHLVNLRRRIKDKNDNDLCRSAENAIGNLLWLAFAKSNIIMADNNNNHETRLDGLVKKLRKALSTINDKFIDNMRTTNNFTRKSTMLKSLNIKSIMKGDEEAEEVDSLGFTSWCNLGFYEVDFGWGKPIWVSSIGSCDSVFMNLVVLVDSRFGDGIEAWITLDEPFMAHLETNPELLGFAMLDPNPLASPGLGSQALCKI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0516 511 Pfam Transferase family 17 487 - -
Lele47g0516 511 Gene3D - 241 488 IPR023213 -
Lele47g0516 511 Gene3D - 15 222 IPR023213 -
Lele47g0516 511 PANTHER F21J9.9 19 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0516 Lele-ChrLele47 4324341 4327306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0516 44 446 Monolignol Biosynthesis Gene Families AT5G48930 22.871 4.15e-19 87.8