Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0512 ATGTCTTCATCGGCGTCTGGTTCATGGAGTGAAAAGGACAACAAAGCCTTTGAAATGGCCCTCGCTGTTTATGACAAGGAAACACCAGACCGTTGGTACAACATTGCTCAGGCTGTTGGCGGCAATAAAACCTCAGAAGACGTGAAGAAACACTATCAACTCCTTCTACAAGATCTCAAGTGTATCGAGTCCGGCCAAGTGCCCGATCCTCTTTACAAGTAG 222 0.4685 MSSSASGSWSEKDNKAFEMALAVYDKETPDRWYNIAQAVGGNKTSEDVKKHYQLLLQDLKCIESGQVPDPLYK 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0512 73 CDD SANT 11 56 IPR001005 -
Lele47g0512 73 ProSiteProfiles Myb-like domain profile. 1 56 IPR001005 -
Lele47g0512 73 FunFam Transcription factor SRM1 1 69 - -
Lele47g0512 73 Pfam Myb-like DNA-binding domain 7 56 IPR001005 -
Lele47g0512 73 Gene3D - 1 68 - -
Lele47g0512 73 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 72 IPR044636 GO:0003700
Lele47g0512 73 SMART sant 5 58 IPR001005 -
Lele47g0512 73 SUPERFAMILY Homeodomain-like 7 64 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0512 Lele-ChrLele47 4250144 4250365 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele47g0512 Myb_DNA-binding 2.2e-06 CL0123