Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0510 ATGGCTGAGGCGGTGACTTGTAATCCGACGGCTCTGAGTTCATGTGCGGGAGCAATATCTTCATCGGCGAAGCCATCGAGCGAGTGTTGCCAGAAGCTGAAGGAGCAAAAGCCATGTCTGTGTGGTGCCCGAGGAAATGATTTTAGGTCTTCCTTCTTCACTGTGTTCTTTCGTGCATCGATTTGGCGAAACCGATACTGCATCGTGTTCACGACCAGTTGTCTCTTGCGTTTTTCTCTGGCTCTGGTGAATCCTCATTTATTCTGTCTTTACAGAATGGTGAGGAAGAGAATTCCGAATCTGCCAGTGTTTACTTTTAAAACACCTAATTTGGATTCAGGCTCAAACCTTAAAGAGCATGCAACCGCATCCCCAATCTCTAACCATAAGACCATTCCCTCCTCACAATACAAAACTATTTTCTTACATGATTGGTGGCTGGTGAAACCTCAAGGCAAAGGTTTAGCTGTGGGAGGAGTTGCTTCAATGGAGAGGCTTGGGGAAAGAGTAATTTCTTCTTCACCTATTGCAAAGAGACACGAGATCAATGTCCTTGAAACACAAGATGGGATCACATTTATTATCTCTGGTTTCATAAACAAGTCTCGCACAAATGAAAATGGCTTTTCATTTGAGGTATGCAGACGTTTCCTGTTGGGATTTCCACTTGACTGGGAAGAGTACGTATCCTATGGTGTTGGCGAACAACTTAATAACAATGGAAATACTGTGCTTAATGATACAACTGCTAGTGCCCCTTAG 762 0.4396 MAEAVTCNPTALSSCAGAISSSAKPSSECCQKLKEQKPCLCGARGNDFRSSFFTVFFRASIWRNRYCIVFTTSCLLRFSLALVNPHLFCLYRMVRKRIPNLPVFTFKTPNLDSGSNLKEHATASPISNHKTIPSSQYKTIFLHDWWLVKPQGKGLAVGGVASMERLGERVISSSPIAKRHEINVLETQDGITFIISGFINKSRTNENGFSFEVCRRFLLGFPLDWEEYVSYGVGEQLNNNGNTVLNDTTASAP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0510 253 Pfam Probable lipid transfer 6 46 IPR016140 -
Lele47g0510 253 Gene3D - 5 74 IPR036312 -
Lele47g0510 253 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 7 54 IPR036312 -
Lele47g0510 253 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 125 240 - -
Lele47g0510 253 Pfam SANTA (SANT Associated) 140 228 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0510 Lele-ChrLele47 4226923 4233085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0510 2 54 Acyl Lipid Metabolism Gene Families AT3G18280 58.491 8.59e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele47g0510 SANTA 7e-24 No_clan