Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0494 ATGGTATTCGTTTTCCGATTGACCAAAATGTACACTTCAAGAAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAATTTGAGGAGACAGTTGCACAGTACCTATTTGATCTTGAGAACACCAATCAGGAGCTGAAAAGTGACCTGAAGGATCTCTACATAAATCAAGCACTTCAAATGGATGTTGCTGGGAATCGCAAAGCTGTTGTTATCTATGTGCCTTACAGATTGAGGAAGGCATTCCGCAAGATTCATCTCAGACTTGTGAGAGAATTGGAAAAGAAATTCAGTGGAAAGGATGTTGTCGTGATTGCTACAAGAAGGATTGTGCGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGACCTCGCACACGCACCCTAACAGCTGTCCATGATGCCATGCTGGAGGATGTTGTGCATCCTGCTGAGATTGTGGGCAAGCGAGTCAGATACAGGGTTGATGGATCAAAAATAATGAAGGTATTCTTGGACCCTAAAGAGCGCAACAATACTGAATACAAGCTAGAAACTTTCTCTGGAGTTTACAGGAAGCTTACAGGGAAAGATGTAGTATTTGAGTATCCAATCACTGAAGCCTGA 603 0.4295 MVFVFRLTKMYTSRKKIHKDNDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYINQALQMDVAGNRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAVQRPRTRTLTAVHDAMLEDVVHPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPITEA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0494 200 Pfam Ribosomal protein S7e 16 195 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele47g0494 200 PANTHER 40S RIBOSOMAL PROTEIN S7 10 199 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele47g0494 200 ProSitePatterns Ribosomal protein S7e signature. 88 101 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele47g0494 200 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0494 Lele-ChrLele47 3917832 3919498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0494 10 200 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 81.152 3.65e-116 326