Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0484 ATGGTTTCTTTGATTTGCCTTCTTCAGAAGAAGACCCATGAGAGTATCAATAACAGGCTCGCTCTTGTGATGAAGAGCGGAAAATATACCCTGGGTTATAAAACGGTTCTGAAGTCCCTTAGGAACTCTAAAGGGAAACTGATTATTATTGCCAACAACTGCCCACCTTTGAGGAAGTCAGAAATAGAATACTACGCTATGTTGGCGAAGTTGTTGATTTTGGTTTCCGCTTTATTTGTGAAGCCCGAAACCTTTTGTACTCTTCTTGAGCCAAGCAAACCATCTGGTGATTCTGACATCATTAAGACCATGCCTGGCGATCAAAACTCATGCTGTGGTCTTGAACCATCTGTGGTGTACGTTTCTTTGGTAGGGTTATAG 381 0.4199 MVSLICLLQKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKLLILVSALFVKPETFCTLLEPSKPSGDSDIIKTMPGDQNSCCGLEPSVVYVSLVGL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0484 126 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 15 67 IPR004038 -
Lele47g0484 126 PANTHER RIBOSOMAL PROTEIN L30 9 74 IPR039109 GO:0003723
Lele47g0484 126 Gene3D - 7 103 IPR029064 -
Lele47g0484 126 ProSitePatterns Ribosomal protein L30e signature 1. 26 50 IPR022991 -
Lele47g0484 126 SUPERFAMILY L30e-like 15 72 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0484 Lele-ChrLele47 3835170 3837347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0484 10 108 Cytoplasmic Ribosomal Protein Gene Family AT3G18740 62.385 3.39e-39 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0910 45 19817703 19819955 Lele47g0484 47 3835170 3837347 hybridization
Lele46g0993 46 17722919 17724898 Lele47g0484 47 3835170 3837347 hybridization