Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0474 ATGAGACACACCCTCCCACTAATTATGTGTCTCTTGTCTTCTTCCTTATGCCCTCTTATCCCTCTCTCTCTCTCTACTTTCAAGTTTTTACCACTCAGTAATACGCTTACCACTGGAATATCTGGTACAGCTCATGAGTTAATCAAAATGATGTTCACTCCTACTAATAATAATTACAGCAACTATTGCTTCCCTTTCTCTTCATCTTCTTCTTCTTCCTCTTTTTCTTTCCCTCTTCTTCATCATACTTCAGCTTTTGAAAACAATGCTTCTTCTTCTGCTGCTGCGATGATGATGAATGCCACCTTTTACCATCACGATCATCTTTCTTCTCTCCCATTCATACCCACTTTAATCCCAGAACCAGTATTAACAAATCATCTCGCTGCACCCTCAGATGGTTGTGTGGTCGGGAAACTGCAGAACATTGCTCCCGATTGTAATGTCGTTTCTGGTAATTTCATCGCCAAGAAGCCTTCTAAGAAGGATAGGCACAGCAAGATTTACACATCTCAGGGTCTCAGAGATCGACGAGTGCGATTGTCCATTGAGATCGCTCGCAAGTTCTTCGATCTGCAAGACATGTTAGGGTTCGACAAAGCCAGCAATACTCTCGACTGGCTCTTCACCAAGTCCAAGAAAGCAATTCAAGAGCTCGAAGTTGCAGCTCGAAGCAAGAAGAAAAGCAGCAAGACCAACACCAATACCACCTTCTCTTCTTCTTCTGATGAGTACTTTGAAGAAGTGGTTTCACCACAGAGGGCGGTGGATTCATCAGATTCCGGCAAGCCGACGACAACGACAAGGTCAGAGATGGAGAAGGCGGCGAAGAAGGAGTCGAGGGAGAGGGCGAGGGCGAGGGCAAGGGCGAGGGCTAATCACAAGGGAAAGAGCTTAATGGAAGATGATAAAGAAACTGAGGATTGTACTACTGTAATCAAAAGGAAGATGATGAAGCAGCCTTGTAATCTGATGAATTCTAATCATCGCCAAAATCATCTTGTGATCCCTAATCACAAGGAATTAACAAGTTTCACCAACAACACCATCATTAATACTACTACTACTAGTCATGACTACTCTATATTCCCTAATTTGTCTCCGAACTGGGACATTAATGGGCGCTCCAATTTCTGTGCCATAGCCAATATGAATCTGTCCACAGATCTTCAAATCTACGGGAAGTCTTGGGATGAGTGCAACAATCAGCGTCAACACTAG 1221 0.4365 MRHTLPLIMCLLSSSLCPLIPLSLSTFKFLPLSNTLTTGISGTAHELIKMMFTPTNNNYSNYCFPFSSSSSSSSFSFPLLHHTSAFENNASSSAAAMMMNATFYHHDHLSSLPFIPTLIPEPVLTNHLAAPSDGCVVGKLQNIAPDCNVVSGNFIAKKPSKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIQELEVAARSKKKSSKTNTNTTFSSSSDEYFEEVVSPQRAVDSSDSGKPTTTTRSEMEKAAKKESRERARARARARANHKGKSLMEDDKETEDCTTVIKRKMMKQPCNLMNSNHRQNHLVIPNHKELTSFTNNTIINTTTTSHDYSIFPNLSPNWDINGRSNFCAIANMNLSTDLQIYGKSWDECNNQRQH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0474 406 Pfam TCP family transcription factor 160 296 IPR017887 -
Lele47g0474 406 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 154 338 IPR005333 GO:0003700
Lele47g0474 406 Coils Coil 269 289 - -
Lele47g0474 406 MobiDBLite consensus disorder prediction 222 303 - -
Lele47g0474 406 MobiDBLite consensus disorder prediction 270 286 - -
Lele47g0474 406 MobiDBLite consensus disorder prediction 254 269 - -
Lele47g0474 406 ProSiteProfiles TCP domain profile. 161 219 IPR017887 -
Lele47g0474 406 ProSiteProfiles R domain profile. 278 295 IPR017888 -
Lele47g0474 406 MobiDBLite consensus disorder prediction 228 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0474 Lele-ChrLele47 3688663 3690541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0474 157 219 TCP Transcription Factor Family AT1G67260 79.365 3.99e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele47g0474 TCP 3.4e-39 No_clan