Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0471 ATGAAGGGTCCCTCTTCTGGGTTATCACAAAGTTGGTGTAACAGAAATCAAGCAGACCCAACTTTGCAGATGTTTGCTGCAAGTAACATTAATTTCACTGATTATAGCAAGGCGACTGCGAACAATACTAATAACTATGAATTTTCCAACGGAAGGCAGTCTCATGCTTCTGTTGGCAATGAGAGAACTTTTCCTTCTAATGGCTTATCATCAGTTCAGAGATGCGTTGGTCCAAATGGGTTTTCTAACTATAATGCTTCTGGTGGAACAAGCAATCTGAATTCAAGCTCCAAACCAATTTTCTCCCATTTACAGCAACATCATAGAGATCATGTGGACATGGATTGGATCTCAACTGTCACTACACCGAGAGAATACCAACTGTCTTTATGGGGAAATATGATGATCCCTCCATCTGTGAGAACGGAAGCTTCTCAAGCTTTCAATAATTTTACTGCCCAGAACTCTTGCTATCAGTATTCAACTGTCAATAACTTAATGCAATATCAACCCCAGAATTTGGATAGTCAACAAAACTTCCAACATTTTAATCAGTCATATGACAATAGTGCTAATGCATATATTGCCAAGTCAAGACCCTGCTTTCGAAGTAAAGATGAACATTGCTGCCAATTGCAGGGGCAGAAAACATTGAACCAGTCTCAGCTTCCTTCAACACTTATGAATGTGGGTCAACAATTTTCTTCAGCAAGTTCAGCACACCTTTATGGTTCTAATGGAGCTTCATGGGTAGCTTTAAGGAATTTTGATAAATGTAGCAGTGATGCTTGTCATAGTTTGGAATCTGCAGACAACATGATGGTGGACTCTACTGTAAGAGATCATGGCAACTTGGAAAACATTTTACGACCTGCCAAAAGATTGAAAATAGAACCTACTTTTGATGTCTCTTTGAGCAATAATGAGATTTTTGAACGATCCCCGATGGTTCTAACCAATTCTCCCGAAGGACTTCCAGAATTGCCGCAACAACCAGAATCTTCCTTTCCTATCTATTCTGAAGTTACAGAGAACAATATGGAATCATCCGCGAATGCAAAGCAAGATTCTGCAAGCTTAAGCGAGATAGACGACAATGTGAATGGAATAGAAGCCATTCTTTTTGAATTCAGAGAAGCTCATCGTAAATTAAGGGATTCATATCCCAAAAGCAATGATGAGGTAGCCAGAAACTTTGGGGAAAATGGTAGCAGTGATGCTTGTCATAGTTTGGAATCTGCAGACAACATGACGGTGGACTCTACTGTAAGAGATCATGGCAACTTGGAAGACATTTTACGACCTGCCAAAAGATTGAAAATAGAACCTACTTTTGATGTCTCTGTGAGCAATAATGAGATTTTTGAACGATCCCCGATGGTTCTAACCGATTCTCCCGAAGGACTTCCAGAATTGCCGCAACAACCAGAATCGTCTTTTCCTATCTATTCTGAAGTTACAGAGAACAATATGGAATCATCCGCGAATGCAAAGCAAGATTCTGCAAGCTTAAGCGAGATAGACGACAATGTGAATGGAATAGAAGCCGTTCTTTTTGAATTCAGAGAAGCTCATCGTAAATTAAGGGATTCATATCCCAAAAGCAATGATGAGGTAGCCAGAAACTTTGGGGAAAATGGTAGTGGATCAAATTCAAATTCGAGCATACATACTTTCCAGAAAGATCCTAGTGTTGATACAGACAGTGTACAGGAAAGAGGTGGGTTTGACCAGGTCGGGAAAAAAAATACACAAGAAGTTATTGAGCCAAAAGCTGATTTAAAGAAGGCAACAGAGTCTTCAAATATAAAAATAATGACCGTTTCCGATGGCATATTTGGACATAATTTTGATAATGAGACTATTTCTCAAGCTCCAGTAGTTGATGGTGTATTGGAGGAGTCATGCCTCGAAAGCAATGGTCTGATAGCCAGAAACTCAAGGGATAGTGTTTACAGATCAAATTTCAGTATCCAAACTTTCCAAAATGATCCTTTTGGTGATATAGGGGAGGAACAGGACAAAAATGTGATCGACCTGACTGGGAAAAGCATTACTGATGAAGTTATTGAGTCAAAATATGATTTAGAGCAGGGAACAGTGTCTTTAAAAACAAATCCAATGGAAAGTGGTGTTTCCTATGATGTACATGACAAGACTTACAAAAGTGGGACTCTATCTGAAGGCATAGAAGCTGGTAACACATTGGAGGATTCATACGTCAATAGTTATGATGTGAAGTTGAGAGTCAGTAACCTACAGTATGATATTGGCAGTTCAAATTCTAGTGACCACTCTCTCCAGAAAGGTCCTATTTCTGATATAGATGGTTTTCAGAGCAGAAATGAGTTCAACCACTCTGTTGAAGACAACACAAAGGAAGTTACTGAGCCAAAGTTTAAGTTAGAGAATGGAGAAAAGTCTTCAAAACCAACTTTAAGCGGTGTTTCCTTGACTGAAACTTTTACATATGATCAACTAAGGGAACACATTATGAGCCTAAGGCAGGGTTTTGGTCAGAGTACACTTGAGGAAGAAATTGGAATTGGTGAGAACACGTGCACATTGTGTGGAATGGATAATCTTTTCTTTGAACCAGTGCCAATCTATTGCTTAGCTTGTGGCAATCGCATCAGAAGAAACGCAAATTTTTACTGTAGAAGAGCAGAAGAGAATGATACAGAGCAGTGCTTTTGCACCACCTGTTTCAAGAATTCTCAAGGCGAATCTATCCAATTCGATGGAGCATATTTTCCCAAGAAAATATTTGATTGCAGGAAAACCGATAGTTGGGCGCAATGTGATAAATGTAAGAGGTGGCAACATCAGATATGTGCACTCTTCAACGGTAAGAGAAATACAGAAGGCGAATTTCCGTATGTGTGTCCCAAATGCCGCTCAAAGGAAATTGAAGAAGGAAATAGCAAACCCTTAGGGACTGCTATTTTTGGTGCTAAGGACTTGCCAAGGACCAAGCTTAGCGACCATATAGAGCAAAGACTCTTTTCGCGTCTTGAACATGAGAGAGCGCACAAGGCAAAAGTTGAAGGGAAGAATGTTGATGAGATTTCTGGAGCAGAAAATCTTACTGTAAGGGTGGTGCAATCAGTTGAAAAGCAATTGAAAGTGAAAAAGGAGTTTCTTGACATCCTGTCTGGGGAGACTTACCCTCCAGAGTTCCCATACACGTCAAAAGTTATTCTGTTGTTCCAGAACATCGAGGGAGTAGATGTGTGTATCTACGTTATTTTTGTCCAGGAGTTCGGCTCAGAATGTGATCACCCCAATCATCGTTCTGTGTACATCTCATATCTTGATTCAGTCAAGTATTTTAGGCCTGAAAGAGAGACTGTGACTGGGGAAGCTCTTCGGACATTTGTGTATCATGAAATATTGAAACGAGGTTTCGAAAAATGTTACATATGGGCATGTCCTCCTCCAAAAGGGGAAGATTATGTTCTATATTGCCATCCTCAGAGCCAGAAAACTCCAAAGAATGATAAACTAAGACACTGGTATCATTCAGTGTTAAGAAAGGCTACTGCAGAAAACATTGTAGTTGGTTTGACGAATGTCTATGATCAGTTCTTTGTTACCGCTCAAAGAAGAGACTCCTACAAGGTGACAGCTGCTCGTTTGCCATACTTTGATGGAGACTACTGGTCTGGTGCTGCTATGGATGAAATCGAGAAAATTGAACAAGAGAGTAAAGCAGAGTCAGGCAAAAAGTTGAAACAAGTATTGACCAAAAGAGCTCTAAAGTCAATGGGACATACAAACCCTTCAAAAGACGTGTTGTTGGGCCAAACCATATTACCCGTCAAGGAAGACTTCATCATAATCCAGTTGCAGTATGCATGCACGCTTTGTCGTGAGGTGATATTGTCTGGAAAGCGATGGTTTTGCACTGAGTGCAAGAAATACCAGCAGTGTGAAAGATGCCACACTTCTGACACACATACTTCAATTGGTGGGGAGAAGCATACTCTCTGCCAGGTTGTCGTGGATGACATCCCCAGTGATACTAAGGAGAATGATATCGTCCTGGGCAATGATTTATTTCAGAATAGGGTTGATTTTGTTAATTTCTTCCAACAGAATCTACTTCAGTTTGATACACTCCGTCGTGCCAAGCATTCCTCAATGATGCTTCTCTATCATCTCAAGAGTTCTGCTTCACATAATATGGATTCAAGATGCCGCATTTGCCGTAAAGATAATGTTTCCCAGCTGAGCTTACAATGTGATTTTTGTCCACAGTTGTCCATCTGCTCAGAATGCTATGAGGAAAAAGGTGCTAATTGCCATGAGCATGAGTTGAGACAATGTTCTTCCACATCTCATTGTCTGTCGGAGAATCAAGGGTTAGAGCAGAAAACTACCGTGGTAGTTGAGTTTGAATCTACGAGACTGTTTAAGGGACTTGACTATTTCTACCAGAGACAGAAACTTCTGAAAGCTTTAAGACACGCATCTCAATGTAACTCAACCATAAGTCAACCATGCTCTTATCCAGACTGTCTTCTGATCAAAAAGCTGTTTTCCCATGCAAGTAAGTGCACTGTTAAAGCACGTGGGGGTTGCCAACACTGTAAGAAGGCATGGACGGTGTTGAGTCTTCACTCAAAGAATTGCAAGGGCTCTGAGTGTTGCATCCCAAGATGCAATGATATGAAGAATTATGCAGAATGGTTAGCACAGCAACATGAATCTCAGCGACGAGTTGCAGTTTTAGGATCAGCAAAGAGAAACAGCAATGGAGGTCGCTGCTGTAAAGCATAA 4782 0.4051 MKGPSSGLSQSWCNRNQADPTLQMFAASNINFTDYSKATANNTNNYEFSNGRQSHASVGNERTFPSNGLSSVQRCVGPNGFSNYNASGGTSNLNSSSKPIFSHLQQHHRDHVDMDWISTVTTPREYQLSLWGNMMIPPSVRTEASQAFNNFTAQNSCYQYSTVNNLMQYQPQNLDSQQNFQHFNQSYDNSANAYIAKSRPCFRSKDEHCCQLQGQKTLNQSQLPSTLMNVGQQFSSASSAHLYGSNGASWVALRNFDKCSSDACHSLESADNMMVDSTVRDHGNLENILRPAKRLKIEPTFDVSLSNNEIFERSPMVLTNSPEGLPELPQQPESSFPIYSEVTENNMESSANAKQDSASLSEIDDNVNGIEAILFEFREAHRKLRDSYPKSNDEVARNFGENGSSDACHSLESADNMTVDSTVRDHGNLEDILRPAKRLKIEPTFDVSVSNNEIFERSPMVLTDSPEGLPELPQQPESSFPIYSEVTENNMESSANAKQDSASLSEIDDNVNGIEAVLFEFREAHRKLRDSYPKSNDEVARNFGENGSGSNSNSSIHTFQKDPSVDTDSVQERGGFDQVGKKNTQEVIEPKADLKKATESSNIKIMTVSDGIFGHNFDNETISQAPVVDGVLEESCLESNGLIARNSRDSVYRSNFSIQTFQNDPFGDIGEEQDKNVIDLTGKSITDEVIESKYDLEQGTVSLKTNPMESGVSYDVHDKTYKSGTLSEGIEAGNTLEDSYVNSYDVKLRVSNLQYDIGSSNSSDHSLQKGPISDIDGFQSRNEFNHSVEDNTKEVTEPKFKLENGEKSSKPTLSGVSLTETFTYDQLREHIMSLRQGFGQSTLEEEIGIGENTCTLCGMDNLFFEPVPIYCLACGNRIRRNANFYCRRAEENDTEQCFCTTCFKNSQGESIQFDGAYFPKKIFDCRKTDSWAQCDKCKRWQHQICALFNGKRNTEGEFPYVCPKCRSKEIEEGNSKPLGTAIFGAKDLPRTKLSDHIEQRLFSRLEHERAHKAKVEGKNVDEISGAENLTVRVVQSVEKQLKVKKEFLDILSGETYPPEFPYTSKVILLFQNIEGVDVCIYVIFVQEFGSECDHPNHRSVYISYLDSVKYFRPERETVTGEALRTFVYHEILKRGFEKCYIWACPPPKGEDYVLYCHPQSQKTPKNDKLRHWYHSVLRKATAENIVVGLTNVYDQFFVTAQRRDSYKVTAARLPYFDGDYWSGAAMDEIEKIEQESKAESGKKLKQVLTKRALKSMGHTNPSKDVLLGQTILPVKEDFIIIQLQYACTLCREVILSGKRWFCTECKKYQQCERCHTSDTHTSIGGEKHTLCQVVVDDIPSDTKENDIVLGNDLFQNRVDFVNFFQQNLLQFDTLRRAKHSSMMLLYHLKSSASHNMDSRCRICRKDNVSQLSLQCDFCPQLSICSECYEEKGANCHEHELRQCSSTSHCLSENQGLEQKTTVVVEFESTRLFKGLDYFYQRQKLLKALRHASQCNSTISQPCSYPDCLLIKKLFSHASKCTVKARGGCQHCKKAWTVLSLHSKNCKGSECCIPRCNDMKNYAEWLAQQHESQRRVAVLGSAKRNSNGGRCCKA 1593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0471 1593 Gene3D - 1281 1331 IPR043145 -
Lele47g0471 1593 SMART KAT11_2 1015 1294 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele47g0471 1593 PANTHER CBP/P300-RELATED 155 1579 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele47g0471 1593 SUPERFAMILY FYVE/PHD zinc finger 924 969 IPR011011 -
Lele47g0471 1593 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 982 1393 IPR031162 GO:0004402
Lele47g0471 1593 SMART TAZ_2 1474 1556 IPR000197 -
Lele47g0471 1593 SMART PHD_3 898 966 IPR001965 -
Lele47g0471 1593 ProSiteProfiles Zinc finger PHD-type profile. 896 968 IPR019787 -
Lele47g0471 1593 MobiDBLite consensus disorder prediction 531 593 - -
Lele47g0471 1593 MobiDBLite consensus disorder prediction 541 565 - -
Lele47g0471 1593 CDD RING_CBP-p300 864 930 IPR010303 -
Lele47g0471 1593 SUPERFAMILY RING/U-box 1268 1324 - -
Lele47g0471 1593 ProSiteProfiles Zinc finger TAZ-type profile. 1473 1558 IPR000197 -
Lele47g0471 1593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 924 969 IPR013083 -
Lele47g0471 1593 Pfam Histone acetylation protein 1023 1227 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele47g0471 1593 Gene3D TAZ domain 1478 1582 IPR035898 -
Lele47g0471 1593 SUPERFAMILY TAZ domain 1476 1558 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0471 Lele-ChrLele47 3634142 3643130 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lele47g0471 HAT_KAT11 2.5e-23 CL0257