Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0466 ATGAAGATGGCAAGGGTAAGAGATAGAACGGGGGATTTTAAAGATGCTGTACGACATAGTGCTCGCTCTTTGGGGTATGATGAGGCCAAATTGGCATCAGTCATGGCTTCTTTTATTATTCACAAACCTCGGCAAATGTCACCATTTACTAAAGCTGCATTGAAGACGCTTGAGAGTATTGGAGAGTTGGACCAGTTCTTGTTGAAGCACAGAAAGGATTATACAGATCTGCGCCGCACAACTGAGCAGGAGAGAGATAGCATAGAACATGAAGTCAGTACTTTTATTAAAACTTGCCAACAGCAAATTGAAGTTCTCAAAAACAGTATTAATGATGAAGAGGTGAATTCAAAAGGTTGGCTTGGCATTGCAGCTTCCAAGTCTAATGCTGACACTATAGCCCACAAACATGGAGTGGTTCTAATTCTGAGTGAGAGACTCCATTCAGTAACTGCTCAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAGAGCTATACCACGAAGAAAACTTAACCGTATGACCAAAAAGGATACTGCAGAAGCTTCAAACTCAGGCAATATGGAGCTCAGAGAACCTGACGAATCACTCAATGAGCCTCTAAGAGTCCAACAGCAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAGTCTTCTAGATGCAGTTCAAGAGACTGAAACAAAGATGGTGGAAATGTCTGCACTAAATCACTTATTATCTACCCATGTTTTGCAACAAGCTCAGCAAATTGAGCTCCTATACGATCAGGCTGTTGAAGCTACCAAGAATGTGGAGCTTGGTAACAAAGAACTATCCCAAGCCATTCAGCGGAATAACAGCAGCAGGACATTTCTTGTGTTGTTTCTTTTTGTGCTCACTTTTTCCGTCCTCTTTCTTGATTGGTACAGCTGA 936 0.422 MKMARVRDRTGDFKDAVRHSARSLGYDEAKLASVMASFIIHKPRQMSPFTKAALKTLESIGELDQFLLKHRKDYTDLRRTTEQERDSIEHEVSTFIKTCQQQIEVLKNSINDEEVNSKGWLGIAASKSNADTIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINRAIPRRKLNRMTKKDTAEASNSGNMELREPDESLNEPLRVQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLLSTHVLQQAQQIELLYDQAVEATKNVELGNKELSQAIQRNNSSRTFLVLFLFVLTFSVLFLDWYS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0466 311 Coils Coil 96 116 - -
Lele47g0466 311 Gene3D - 214 308 - -
Lele47g0466 311 PANTHER SYNTAXIN-18 3 311 - -
Lele47g0466 311 Pfam SNARE-complex protein Syntaxin-18 N-terminus 8 88 IPR019529 -
Lele47g0466 311 SUPERFAMILY t-snare proteins 58 275 IPR010989 GO:0016020|GO:0016192
Lele47g0466 311 FunFam Syntaxin-81 like 214 308 - -
Lele47g0466 311 MobiDBLite consensus disorder prediction 177 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0466 Lele-ChrLele47 3542057 3546649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0466 67 311 SNARE and Associated Proteins AT1G51740 74.390 5.59e-116 333