Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0443 ATGAAACCCTCGAGACATCAACGAGGAGTCTGCAAGGCCTTGTGTTGCAGCTGCAACAGCAGGCTCAGTGTTTCTTCTTCCTCAGAATTAGATGCTGCAGAAACCAGTTCTTCATCATCAGCTTCTGCAGCTGATAGGTTCCCTTCTGTTTCAAGCTTAGCTCACGCCATGGTTCAAGAGAGGCTTGATCAATTGATAAGATCAGATCAGAGAGAGAAATCATCGGCGAGGCTCCACCATCATCAGAATCAGAATCAGAATCAGAATCAGAATCATCACCATCTTCTTCAGCAGAATCATCGGTTGCAGAAGAGAAGAGAACAAGAAGAAGCTGGAGGAACCAAGTTTGTGGTGATGATGGCAATGGAGAAGAGTTCTTATGATCCAAGAGAGGATTTCAGAGAGTCGATGGTGGAGATGATAATGGCTAATCAACTTCAAGATGCCAAAGAACTACGGAGTTTGTTAAATTATTATGTTTCGATGAATTCACAAGAGTATCATAGTGTTATACTAGAGGTCTTTCATGAGGTTTGTTCTAATCTCTTCTTATCATCATCTAAATGCCGATATTGGTAA 579 0.418 MKPSRHQRGVCKALCCSCNSRLSVSSSSELDAAETSSSSSASAADRFPSVSSLAHAMVQERLDQLIRSDQREKSSARLHHHQNQNQNQNQNHHHLLQQNHRLQKRREQEEAGGTKFVVMMAMEKSSYDPREDFRESMVEMIMANQLQDAKELRSLLNYYVSMNSQEYHSVILEVFHEVCSNLFLSSSKCRYW 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0443 192 Pfam Transcriptional repressor, ovate 126 183 IPR006458 -
Lele47g0443 192 ProSiteProfiles OVATE domain profile. 122 181 IPR006458 -
Lele47g0443 192 Coils Coil 85 105 - -
Lele47g0443 192 MobiDBLite consensus disorder prediction 69 91 - -
Lele47g0443 192 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 120 183 IPR006458 -
Lele47g0443 192 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 35 185 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0443 Lele-ChrLele47 3354604 3355182 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele47g0443 Ovate 1.7e-21 No_clan