Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele47g0438 | ATGGAAGAAGGTGGTTCTAATGGGACTTCTTCATGTGTGATGGGTTTTGTTGGAGAGAACAGTAACCACAATAGTGGTGGTGGTGGGGGGTTGTGTGCATCTTCATCTCATCCAATGATGATGATGATGCCTTTTGTGACTACTTGTCATAATGTTTCCCATCAAATTCCATTCAGTCCTAATCCTATCAATAATAATGCTCCTCCATCACACACTGCTCCTTTCCTTCTTCCTTTCCCTCCTTCCTGCACTAATAACACTTCTACTTCTAATCATCAACCCCAAAACCCCAACAACAACAACAGTTCTGGGTTAGCCTCCTTTTTCATGGACGCCACCACCAACAACAACAACAACGGTAGCTCGGCGTCTTCTTCTTCTGCTGCTGCTAAAGCAAAGATCATGGCTCATCCTCACTATCATCGTCTTTTGTCTGCCTATGTTAATTGTCAAAAGGTTGGAGCGCCGCCGGAAGCGGTGGCGAGGTTAGAGGAAGCATGTGCGTCTGCGTTGACAATGGCAGCTGCTGGCGGCGCCGGCGCGGGTTCGGTGTGTATCGGAGAAGATCCGGCACTCGATCAGTTTATGGAGGCATATTGTGAGATGCTGACCAAGTATGAGCAAGAACTCTCCAAACCCTTCAAGGAAGCTATGCACTTTCTTCATACCATCGAGTCTCAGTTCAAAGCTCTCGCTATTTCTTCTTCTTCTTCAGACTTCGCTAATGGTGAGGCGAGCGATCGGAATGGATCATCTGAAGAAGACACGGATGTGCCGAAGAATCTGATCGATCCACTGGCAGACGACCAAGAACTGAAGGGCCAACTTCTTCGCAAATACAGCGGATACCTGGGCAGCCTGAAGCAGGAATTCATGAAGAAGAGGAAGAAAGGGAAGCTTCCCAAAGAAGCAAGACAACAACTTCTTGATTGGTGGAGCAGACACTATAAATGGCCGTACCCATCTGAGTCACAGAAGCTGGCACTGGCAGAATCAACAGGACTGGATCAGAAGCAAATAAACAATTGGTTCATAAACCAAAGGAAGCGACATTGGAAACCATCAGAGGATATGCAATTCATGGTGGTGGATCCTTCTCATCCTCATCACCACTATTACATGGACACTGTTCTTGGCAATCCCTATCCAATGATCTAA | 1158 | 0.468 | MEEGGSNGTSSCVMGFVGENSNHNSGGGGGLCASSSHPMMMMMPFVTTCHNVSHQIPFSPNPINNNAPPSHTAPFLLPFPPSCTNNTSTSNHQPQNPNNNNSSGLASFFMDATTNNNNNGSSASSSSAAAKAKIMAHPHYHRLLSAYVNCQKVGAPPEAVARLEEACASALTMAAAGGAGAGSVCIGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMHFLHTIESQFKALAISSSSSDFANGEASDRNGSSEEDTDVPKNLIDPLADDQELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVVDPSHPHHHYYMDTVLGNPYPMI | 385 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele47g0438 | 385 | MobiDBLite | consensus disorder prediction | 241 | 262 | - | - | |
Lele47g0438 | 385 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 89 | 360 | - | - | |
Lele47g0438 | 385 | MobiDBLite | consensus disorder prediction | 60 | 111 | - | - | |
Lele47g0438 | 385 | SMART | KNOX2_2 | 182 | 233 | IPR005541 | GO:0003677|GO:0005634 | |
Lele47g0438 | 385 | SMART | KNOX1_2 | 128 | 172 | IPR005540 | GO:0003677|GO:0005634 | |
Lele47g0438 | 385 | SMART | HOX_1 | 293 | 358 | IPR001356 | GO:0003677 | |
Lele47g0438 | 385 | CDD | homeodomain | 303 | 355 | IPR001356 | GO:0003677 | |
Lele47g0438 | 385 | SUPERFAMILY | Homeodomain-like | 293 | 370 | IPR009057 | - | |
Lele47g0438 | 385 | MobiDBLite | consensus disorder prediction | 248 | 262 | - | - | |
Lele47g0438 | 385 | Pfam | Homeobox KN domain | 311 | 350 | IPR008422 | GO:0003677|GO:0006355 | |
Lele47g0438 | 385 | ProSitePatterns | 'Homeobox' domain signature. | 329 | 352 | IPR017970 | GO:0000981|GO:0006355 | |
Lele47g0438 | 385 | FunFam | Homeobox protein knotted-1-like 2 | 296 | 358 | - | - | |
Lele47g0438 | 385 | Pfam | ELK domain | 271 | 292 | IPR005539 | GO:0003677 | |
Lele47g0438 | 385 | MobiDBLite | consensus disorder prediction | 79 | 111 | - | - | |
Lele47g0438 | 385 | ProSiteProfiles | ELK domain profile. | 271 | 291 | IPR005539 | GO:0003677 | |
Lele47g0438 | 385 | SMART | ELK_2 | 271 | 292 | IPR005539 | GO:0003677 | |
Lele47g0438 | 385 | Pfam | KNOX1 domain | 131 | 168 | IPR005540 | GO:0003677|GO:0005634 | |
Lele47g0438 | 385 | Gene3D | - | 296 | 358 | - | - | |
Lele47g0438 | 385 | ProSiteProfiles | 'Homeobox' domain profile. | 291 | 354 | IPR001356 | GO:0003677 | |
Lele47g0438 | 385 | Pfam | KNOX2 domain | 185 | 231 | IPR005541 | GO:0003677|GO:0005634 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele47g0438 | Lele-ChrLele47 | 3291457 | 3296585 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele47g0438 | 130 | 384 | Homeobox Transcription Factor Family | AT1G62360 | 78.682 | 2.85e-128 | 372 |