Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0433 ATGTTCTTCATCACAGCAGTTGAACCCCCACCTGAGACGACTTTCAGCTCCGTCTATTATAGTGGCCGGAAAAAAACAATGGCGGCCCCTCGTGTGGCTTCTTCTCTGTTTCTGCCAATCGCTTTGATCTTTGCTGCTCTTCATCTTGCTTTAGCCAACACTGATGCTACTGATGTTCAAGCGCTTGAGGTTTTGTACAACGCTTTAAACAGCCCGTCTTGGCTTACTGGTTGGAAAATTGGTGGTGGTGATCCTTGTGGAGAGTCTTGGAAAGGGATAACATGTGAGGGCTCAGCTGTTGTTTCCATAGAATTGTCAGGTTTGGGACTCAATGGGACTCTGGGATACCTGCTTTCGGACCTTATGTCACTGAGACAACTTGACTTAAGTGACAACAAGATCCACGACACGCTCCCTTACCAGTTACCACCGAATCTGACAAGCCTGAACCTTGCAAGAAATAACTTGAGTGGAAATCTTCCTTATTCCATTTCTGCCATGACTTACCTCAATTATCTGAATGTGAGCCACAATGGACTCTCTCTGACAATTGGAGACATTTTTGCCGACCTTGCCGATCTTGATACCCTGGATCTATCGTTCAATGACTTTTCTGGAGATCTTCCTCCCTCATTCGGTTCATTGTCCAATCTTTCTTCTGCCTTTTTGCAGAACAATCAGTTGACTGGTTCTCTTACTGTTCTTGTTGGTTTGCCTTTAGATACTTTAAATATTGCGAACAACAATTTCACTGGATGGATACCTCACGAACTTAGTTCAATTAGTAATTTCATATCTGATGGGAACTTCTTTGACAACGGCCCTGCTCCTCCTCCTCCTCCACATACAGCCGCCTCTCCTCCCAGAAGATCTCCAAGTGGCCATCACCATTCTGGATCTGGTTCTCATAAAGCGCATGCTTCTAAATCTGACAACGAAGATGCAGATAGCCATAAGGGCTTATCATCTGGGGCTGTTATAGGCATTATTTTGGGTTCAGTTTTTCTAGCCGTTGTTGCACTACTTGCTCTTGTTTTATGTATCCAAAAGCATAAAAGGAAGGTAAAAGGCGCAAAAACTTCCAATGGGAATCCTCCTCTTGGAACCAATAATGTAATCCCTCCGATGCAAGAACAGAGGGTGAGAAGTGCTGCTGCTGCTGTTACAGATTTGAAGCCGCCTCCTGCTGAAAAAGTGATAGCTGAGAGGGTTCCTTCAAAGAACGGATCTACTAGGCGGATAAAATCCCCTATAACTGCTACATCATACACAATTGCTACTCTCCAAAGTGCAACAAATAGCTTCAGTCAAGAATTTATTATCGGTGAAGGTTCACTTGGTCGAGTTTACAGGGCCGAATTCCCTAATGGGAAGATCATGGCCATTAAGAAGATCGACAATGCGGCACTGTCATTACAGGAGGAAGACAACTTTCTTGAAGCCGTATCAAATATGTCACGCTTGCGGCATCCGAACATTGTTACACTAGCTGGATACTGCGCGGAGCATGGGCAGCGTCTTCTAGTTTATGAGTACATTGGTGGTAATGGAAATCTGCATGATATGCTCCATTTCGCTGAAGATAGCAGCAAGGCTTTATCTTGGAATGCTCGTGTTCGAATATCACTTGGCACGGCCAGAGCTTTAGAGTACTTGCATGAAGTATGCTTGCCTTCTGTTGTACATAGAAACTTCAAATCGGCAAACATATTACTCGACGAGGAGTTGAATCCCCACCTGTCTGATTGTGGTTTAGCTGCTTTAACGCCAAACACCGAACGGCAGGTTTCAACTCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAATCTACACGGTAAAAAGCGATGTTTACAGTTTTGGAGTGGTAATGTTAGAGCTATTGACCGGTCGGAAGCCACTTGACAGTTCACGAGCAAGATCAGAGCAATCACTTGTGAGGTGGGCTACTCCCCAACTTCATGATATAGATGCCTTGGCCAGAATGGTTGATCCCGCTTTGAATGGCATGTACCCTGCGAAGTCACTGTCGCGCTTTGCCGATATCATTGCCCTCTGTGTTCAGCCGGAGCCTGAATTTCGACCTCCCATGTCTGAGGTTGTGCAAGCATTGGTCCGGCTAGTGCAAAGAGCGAGTGTGGTGAAACGCCGCCCCAGTGACGAATCTGGGTTCGGTTACAAAACCCCAGATCATGAAGCCTATGACATGTCATTTTAA 2235 0.4541 MFFITAVEPPPETTFSSVYYSGRKKTMAAPRVASSLFLPIALIFAALHLALANTDATDVQALEVLYNALNSPSWLTGWKIGGGDPCGESWKGITCEGSAVVSIELSGLGLNGTLGYLLSDLMSLRQLDLSDNKIHDTLPYQLPPNLTSLNLARNNLSGNLPYSISAMTYLNYLNVSHNGLSLTIGDIFADLADLDTLDLSFNDFSGDLPPSFGSLSNLSSAFLQNNQLTGSLTVLVGLPLDTLNIANNNFTGWIPHELSSISNFISDGNFFDNGPAPPPPPHTAASPPRRSPSGHHHSGSGSHKAHASKSDNEDADSHKGLSSGAVIGIILGSVFLAVVALLALVLCIQKHKRKVKGAKTSNGNPPLGTNNVIPPMQEQRVRSAAAAVTDLKPPPAEKVIAERVPSKNGSTRRIKSPITATSYTIATLQSATNSFSQEFIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGGNGNLHDMLHFAEDSSKALSWNARVRISLGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALARMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGYKTPDHEAYDMSF 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0433 744 Gene3D Phosphorylase Kinase; domain 1 398 512 - -
Lele47g0433 744 MobiDBLite consensus disorder prediction 725 744 - -
Lele47g0433 744 MobiDBLite consensus disorder prediction 273 287 - -
Lele47g0433 744 ProSiteProfiles Leucine-rich repeat profile. 123 144 IPR001611 GO:0005515
Lele47g0433 744 Gene3D Transferase(Phosphotransferase) domain 1 515 723 - -
Lele47g0433 744 Pfam Leucine rich repeat 144 204 IPR001611 GO:0005515
Lele47g0433 744 CDD STKc_IRAK 441 713 - -
Lele47g0433 744 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 401 512 - -
Lele47g0433 744 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 55 282 - -
Lele47g0433 744 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 515 724 - -
Lele47g0433 744 MobiDBLite consensus disorder prediction 270 318 - -
Lele47g0433 744 Gene3D Ribonuclease Inhibitor 55 274 IPR032675 -
Lele47g0433 744 ProSiteProfiles Protein kinase domain profile. 435 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0433 744 SUPERFAMILY L domain-like 56 263 - -
Lele47g0433 744 Pfam Protein kinase domain 438 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0433 744 Pfam Leucine rich repeat N-terminal domain 56 95 IPR013210 -
Lele47g0433 744 MobiDBLite consensus disorder prediction 304 318 - -
Lele47g0433 744 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 46 714 - -
Lele47g0433 744 SUPERFAMILY Protein kinase-like (PK-like) 413 710 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0433 Lele-ChrLele47 3251201 3255875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0433 167 744 Strubbelig Receptor Gene Family AT4G22130 71.724 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele47g0433 Pkinase 1.6e-42 CL0016