Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0426 ATGCTTCCTGGTTTGGGATTCCCCGTGAATCTTAGCCGCGTAATGGAATCTTCTGATATTAATAATAATAATAATCGGAAGGTCCTCAGTGAAGTTGATTTCTTCTCTAATCCAACAAGCCAGTCGTCGTCTTCATCAGCAGCACCACCACCAGCTCGTGAAATTCATCATCATGAAGGTGTTAAAACCCTTACCAATATCTCTGTCAAGAAGGAAATTACTCAAACTCAACCAGTTTCTAGGTCTAATTTGGATATGAATATTGGTTTACAACTGCATACTAGTCATAATACCAGGAGTGATCAGTCTACGGTGGATGATCATGGCGTGTCGTCAGATGCAGATGACAAGCGAGCCCAGAGCAACGAGTTGAAACATCTGCAAGAAGAGGTTCAGCGAATGAACACAGAAAACCAGAATCTGAAAGAGATGCTGAGTCACATGAGCAATAACTACACCGCCTTGCAAATGCATCTCGCTGCATTGATCCAACAACGACGACACAATAACCAACACGACCATCATCAGGTTGTCGGACAAGGAGGTGAGGAGAACAAGCAGGTGGCGGCGAGGCAGTTTCTTGAACTTGGAGGGGGTAGCTGCGGTAAAGCAGCAGAAGCTGATGATGACGATGTGTCGAATTCTAGTTCAGATGAAAGAACTCAATCTGCTTCACCTCAGAACAACAACAATAATGGTAAAAGTAGTGAGATAATGGGTAGGGAAGAGAGTCCTGACTCAGAATCAAAGAAAGCTTATAAGCTCCAGAAACTCAACCCTTCTTCTTCAAATTCCATGGATCAATCCACCACTACTACCGCAGAAGCCACCATGAGAAAAGCTCGTGTCTCAGTTCGTGCTAGATCAGAAGCCCCCATGATCAGTGATGGTTGTCAATGGCGAAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGCGCTTACTACAGATGCACCATGGCTATTGGTTGTCCTGTTCGAAAACAAGTTCAGCGTTGTGCAGAAGACAGAAGCATATTGGTAACAACGTACGAAGGAAATCATAACCATCCATTGCCTCCGGCAGCTATGGCGATGGCTTCAACGACAAGTGCCGCGGCAGGCATGTTGCTGTCTGGTTCAATGTCAAGTCCAGAAGGGTTGATGAAGATGAACCCTAATATGTTAGCCAGAACCATTCTTAACCCTACTAGTTCTCCAACCATGGCTACTCTTTCTGCTTCAGCTCCTTTCCCTACCGTCACATTGGACCTAACTCACAACGGAATGCAGTTTCAACGCCCTAGTACGACACCGTTTCAGCTGGTTCAACCATTGTATAACCAGTCCATGTTTTCTGGCCTTCACTTGTCACAGGATAGGCCAATTCATCAGCAGTCTTCCCCAGCAGCAGCTGACACTGTCGGTAAAGCCGCTGCGGCGATCACTGCTGACCCGAACTTCACGGTGGCCCTCGCTGCTGCTATCTCTTCCATCATCCGTGGTAATAATCATCAGAACAACAACGGTGGCGACGGCAGTAGCAGTAATCCACATATCCTCAATAGCACTTCAATCAGCAGCTTTTCAGGGAATTAA 1584 0.4596 MLPGLGFPVNLSRVMESSDINNNNNRKVLSEVDFFSNPTSQSSSSSAAPPPAREIHHHEGVKTLTNISVKKEITQTQPVSRSNLDMNIGLQLHTSHNTRSDQSTVDDHGVSSDADDKRAQSNELKHLQEEVQRMNTENQNLKEMLSHMSNNYTALQMHLAALIQQRRHNNQHDHHQVVGQGGEENKQVAARQFLELGGGSCGKAAEADDDDVSNSSSDERTQSASPQNNNNNGKSSEIMGREESPDSESKKAYKLQKLNPSSSNSMDQSTTTTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAIGCPVRKQVQRCAEDRSILVTTYEGNHNHPLPPAAMAMASTTSAAAGMLLSGSMSSPEGLMKMNPNMLARTILNPTSSPTMATLSASAPFPTVTLDLTHNGMQFQRPSTTPFQLVQPLYNQSMFSGLHLSQDRPIHQQSSPAAADTVGKAAAAITADPNFTVALAAAISSIIRGNNHQNNNGGDGSSSNPHILNSTSISSFSGN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0426 527 MobiDBLite consensus disorder prediction 217 238 - -
Lele47g0426 527 MobiDBLite consensus disorder prediction 95 120 - -
Lele47g0426 527 Gene3D WRKY domain 279 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele47g0426 527 SMART WRKY_cls 294 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele47g0426 527 ProSiteProfiles WRKY domain profile. 289 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele47g0426 527 MobiDBLite consensus disorder prediction 200 288 - -
Lele47g0426 527 Coils Coil 117 151 - -
Lele47g0426 527 FunFam probable WRKY transcription factor 31 279 356 - -
Lele47g0426 527 SUPERFAMILY WRKY DNA-binding domain 287 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele47g0426 527 MobiDBLite consensus disorder prediction 239 253 - -
Lele47g0426 527 MobiDBLite consensus disorder prediction 501 527 - -
Lele47g0426 527 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 85 505 IPR044810 GO:0003700
Lele47g0426 527 MobiDBLite consensus disorder prediction 100 120 - -
Lele47g0426 527 Pfam WRKY DNA -binding domain 296 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele47g0426 527 MobiDBLite consensus disorder prediction 254 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0426 Lele-ChrLele47 3191652 3193991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0426 7 505 WRKY Transcription Factor Family AT1G62300 51.386 3.93e-146 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele47g0426 WRKY 3.2e-24 CL0274