Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0424 ATGGACTGGTTTAGGGGTCCCACCATCGGTCGGGGTGCCACCGCCACCGTCTCCATTGCCCATGATCGCCGGTCCGGTCACTTGTTCGCGGTCAAGTCGGCTGAGTTCGACCGATCGGAGTTGCTTCAGAGGGAACAGAAAATTCTGTCCACATTGAAATCCCCTCATGTAGTGGCATACCATGGTTATGACGTTACATTAGAGAGTAATGTACAATGGTACAATCTGATCATGGAGTATGCACCTTATGGTACGATCGCCGACATGGCTCGCCGGCGACACGGGCTAGAAGAGGTGGTGGTTAGAACCTATGCGTGCCAAATCCTTCTGGGGCTGGACCATCTTCATTCTAATGGCATTGTGCATTGTGATATCAAAGGTAAGAATGTTTTGGTGACGGAGGAAGGGGCTAAAATTGCAGACTTGGGTTGTGCTCGGAGGGTGTCTGAGGCGACGGGTGACGGCGGACTGGTTGCTGGCACACCAATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGCAACAGGGGTTCGCCGCCGACTTGTGGTCTCTGGGGTGTACTGTATTAGAGATGATCACCGGGAGGGCTCCTTGGCCGGACGTATCTGACCCGGTAAGTGCGGTTTATCGAATCGGGTTCTCGAGTGATGTGCCGGAGATTCCCGGGTTCATGTCGGAGAAAGGGAGGGACTTTGTTAGCAAGTGTCTGAAGAGAGACCCGAATGAGCGCTGGTCCGTCGGCGAACTCCTCAAACACGAGTTTGTAGAAGACTCAATTTCGTCCATGAAAGTATTTGGAAGCTTGAAGTCGGATACTCCGACTGGTGTAATGGATGGATCCATTTGGGATTCGTGGGAGCCCACACAAGATCCGACCCGTGTTGGTTCCTACAATTCTGGCAGAAACAGGATTCGTAGGTTATGCACAGAAGCTACGACGTCGTTTGGAGGCAATGAGCCCAACTGGGAATGGGAAGAAGGGTGGAAGACAGTGAGAAATAGGAATGAGACAAAAGAGAATTACAAGGTTGACCTTGGAAATGAGACAAGTTTGGGGCGTTGTTATGAACCTAAAACGGTTATTACCGTTGGGTTGTGTGTATGTAATGGGAATTGTAAGGTTAATGGTTGTAACAAAGGATTATTGTTAAGTTATTATGAGTGGTCATGTGTAAGAATTATTGTTAGGAAAAGGAAAATTGAATCTCAAAATAAGGAAATAATTTTTCATGATTTGCTTATCTCTCGCATTCTAAGACTAAGAGGCATTATGGGTCATAATGATTTCACATGTGGCCGACATAAATCATAA 1311 0.4844 MDWFRGPTIGRGATATVSIAHDRRSGHLFAVKSAEFDRSELLQREQKILSTLKSPHVVAYHGYDVTLESNVQWYNLIMEYAPYGTIADMARRRHGLEEVVVRTYACQILLGLDHLHSNGIVHCDIKGKNVLVTEEGAKIADLGCARRVSEATGDGGLVAGTPMFMAPEVARGEQQGFAADLWSLGCTVLEMITGRAPWPDVSDPVSAVYRIGFSSDVPEIPGFMSEKGRDFVSKCLKRDPNERWSVGELLKHEFVEDSISSMKVFGSLKSDTPTGVMDGSIWDSWEPTQDPTRVGSYNSGRNRIRRLCTEATTSFGGNEPNWEWEEGWKTVRNRNETKENYKVDLGNETSLGRCYEPKTVITVGLCVCNGNCKVNGCNKGLLLSYYEWSCVRIIVRKRKIESQNKEIIFHDLLISRILRLRGIMGHNDFTCGRHKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0424 436 Pfam Protein kinase domain 8 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0424 436 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Lele47g0424 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Lele47g0424 436 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Lele47g0424 436 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0424 436 CDD STKc_MAPKKK 2 255 - -
Lele47g0424 436 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0424 436 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 339 - -
Lele47g0424 436 Gene3D Transferase(Phosphotransferase) domain 1 5 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0424 Lele-ChrLele47 3166804 3168114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0424 2 339 MAP Kinase Kinase Kinase AT5G55090 45.961 3.94e-99 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele47g0424 Pkinase 2.3e-52 CL0016