Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0408 ATGACAAATACAGACACTGTTCAAAGGGGAAAATCGGTAGACAGTATTGCTGATCATAGTAACCATTCAAACGCATCGGAGATGACGATTGTTGATGGCCGGTGTTTGGGTACTAGACTGCCAGAGAGAAGATGGAGATCGCCGGCGGCCATTAGGCCTTATGTACGGTCGAAAACGCCTCGGCTTCGGTGGACAGCTGATCTTCACCGTTGCTTCTTGCTTGCAGTTCAAAGGCTTGGGGGAGAAGAGAGGGCAACACCAAAGTTGGTGTTAGAGCTCATGAATGTAAAGGGGCTTACCATTTCTCATGTCAAAAGCCATCTTCAGATGTACAGGAGCATGAGGCATCAGCAGACGATTCAAGGAGCAGCAGCAAAGAAGAATGTAAAGGCTGTGGGTTTCTTACAAGATTCGTCCTTTACCTCAAAAAGTTATAATGGCCAACAGAATGATCACTTTAATGGCATCCAAGCGCAATGGAAGGAGATGAAAGCAGAAAAGGAGGCAGAAAGTGGAGGGGGTGGTAATGATAAAAGATTGGAAGAGGAAGATTTGAAGAAGATTGGAGAGAGAGGAGTGCATGTTCATGAAGACGACGACGACAAGCTGTCTCTGTCAATTCCGCCATGGTTGAACCAGACCACCCACCTTGGTCTTCACCCAAATGATGTCTCTCTTCACCTCACTCTCTCCAGCTTCAACACCATTCATCACTAA 717 0.4658 MTNTDTVQRGKSVDSIADHSNHSNASEMTIVDGRCLGTRLPERRWRSPAAIRPYVRSKTPRLRWTADLHRCFLLAVQRLGGEERATPKLVLELMNVKGLTISHVKSHLQMYRSMRHQQTIQGAAAKKNVKAVGFLQDSSFTSKSYNGQQNDHFNGIQAQWKEMKAEKEAESGGGGNDKRLEEEDLKKIGERGVHVHEDDDDKLSLSIPPWLNQTTHLGLHPNDVSLHLTLSSFNTIHH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0408 238 FunFam Myb family transcription factor 58 116 - -
Lele47g0408 238 Gene3D - 59 117 - -
Lele47g0408 238 MobiDBLite consensus disorder prediction 1 21 - -
Lele47g0408 238 SUPERFAMILY Homeodomain-like 57 114 IPR009057 -
Lele47g0408 238 Pfam Myb-like DNA-binding domain 62 112 IPR001005 -
Lele47g0408 238 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 60 113 IPR006447 GO:0003677
Lele47g0408 238 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 46 174 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0408 Lele-ChrLele47 3058610 3063499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0408 51 113 G2-like Transcription Factor Family AT2G42660 74.603 4.87e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele47g0408 Myb_DNA-binding 1.3e-06 CL0123