Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0402 ATGTTCATGAGAGTTTCAGATTTCTGTGATATTTTGTTACTAACCAATCGTCTGTTGCCGGGTGGACAATCTAGTCACAGGTCGGGTGTCTCCTCAGTGCATCGTCACTCTCACTGCTCTAAAAATATGGCTGAGCCTTCACAAGTTGCTCTTAGTCCTGAATTGTTGGAATGGCCAAAGAAAGATAAGCGCCGCTTCCTTCATGCCGTATACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTACACTGAAGCTTTTGGAATGAAGCTTTTGAGGAAAAGAGATGTTCCAGAGGAAAAATATTCCAATGCTTTTCTTGGATTTGGCCCTGAAGAAAACAATTTTGTTGTGGAGTTAACATATAATTATGGGGTGAGCTCCTATGATATTGGAACTGGCTTTGGACATTTCGCAATTGCAACTCCAGATGTTTACAAAATGGTTGAACACGTCCGGGCCAAGGGTGGAAACGTCACTAGGGAGCCTGGTCCAGTTAAGGGTGGGAGCACGGTCATTGCATTTGTGAAGGACCCTGATGGTTACTTGTTTGAGATCATCCAAAGAGAATCAACCCCTGAGCCACTGTGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATTAAGTTCTATGAAAAGGCTTTGGGTATGAAGGTGGTAAAGAAAGTTGATAGACCTGAGTACAAGTACACAATCGCCATGCTTGGGTATGCAGAGGAGCATGAGACAACTGTCTTGGAGTTGACATATAACTATGGTGTCACTGAATACACTAAAGGAAATGCATATGCGCAGGTTGCTATTGGCACTAATGATGTATACAAGAGTGCTGAGGTAGTCAACCATGTGATACAAGAGTTAGGCGGGAAGATCACTCGGCAACCAGGGCCAATTCCTGGCCTTAACACAAAAATCACTTCCTTCTTGGATCCAGATGGGTGGAAAACTGTGCTGGTTGACAATGAAGACTTCCTGAAGGAATTGAAGTGA 996 0.4378 MFMRVSDFCDILLLTNRLLPGGQSSHRSGVSSVHRHSHCSKNMAEPSQVALSPELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTEAFGMKLLRKRDVPEEKYSNAFLGFGPEENNFVVELTYNYGVSSYDIGTGFGHFAIATPDVYKMVEHVRAKGGNVTREPGPVKGGSTVIAFVKDPDGYLFEIIQRESTPEPLCQVMLRVGDLERSIKFYEKALGMKVVKKVDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTNDVYKSAEVVNHVIQELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0402 331 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 64 190 IPR029068 -
Lele47g0402 331 ProSitePatterns Glyoxalase I signature 1. 198 219 IPR018146 GO:0004462|GO:0046872
Lele47g0402 331 ProSitePatterns Glyoxalase I signature 2. 132 144 IPR018146 GO:0004462|GO:0046872
Lele47g0402 331 TIGRFAM glyox_I: lactoylglutathione lyase 196 326 IPR004361 GO:0004462|GO:0046872
Lele47g0402 331 TIGRFAM glyox_I: lactoylglutathione lyase 54 198 IPR004361 GO:0004462|GO:0046872
Lele47g0402 331 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 65 189 IPR037523 -
Lele47g0402 331 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 195 323 IPR037523 -
Lele47g0402 331 Gene3D - 37 191 IPR029068 -
Lele47g0402 331 CDD GlxI_Ni 67 187 - -
Lele47g0402 331 Gene3D - 192 331 IPR029068 -
Lele47g0402 331 FunFam Lactoylglutathione lyase 62 191 - -
Lele47g0402 331 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 67 186 IPR004360 -
Lele47g0402 331 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 198 317 IPR004360 -
Lele47g0402 331 PANTHER LACTOYLGLUTATHIONE LYASE 47 330 - -
Lele47g0402 331 FunFam Lactoylglutathione lyase 192 331 - -
Lele47g0402 331 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 196 322 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0402 Lele-ChrLele47 3009276 3012819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0402 198 322 Calmodulin-binding Proteins AT1G08110 28.667 6.52e-11 59.7