Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0396 ATGTGCGTTCTGATCAGCAACTCCCTTGAGTACCATCTTGCCTTCTTTCCCGGTGGGTTTGTCTCTGAGCGAAAGTCACCGATAGCCGCGTTGAGCGTCACCGGTGTAGAGCAGAAGCCAAGACCCCCACCTTTGGATGGTGGTGAACACCGTGAACGGATTCGCCTCTGGCCTGCGGCAACCATCCATCAAGTTTCTGAGATATTTATTTGGAGGCTTCTGGTGAAGAACATGAGCAACTCAAATCATACAACCAAAATTGGCAATGGCCATATTGATGCCAAGGAGACAAGAGCTGAGGATGCTCATCAGCTGCTGGAATTCTCTGAAGATGAGGAAGCACTCATTGCTAGAATGTTCAGATTGGTTGGCAACAGGTGGTCTTTGATTGCTGGGAGAATACCTGGAAGAACTGCTCAAGAGATAGAAAAGTACTGGACTTCCAAGTGCTCTTCATGA 459 0.4837 MCVLISNSLEYHLAFFPGGFVSERKSPIAALSVTGVEQKPRPPPLDGGEHRERIRLWPAATIHQVSEIFIWRLLVKNMSNSNHTTKIGNGHIDAKETRAEDAHQLLEFSEDEEALIARMFRLVGNRWSLIAGRIPGRTAQEIEKYWTSKCSS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0396 152 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 152 IPR017930 -
Lele47g0396 152 Pfam Myb-like DNA-binding domain 107 146 IPR001005 -
Lele47g0396 152 SUPERFAMILY Homeodomain-like 108 148 IPR009057 -
Lele47g0396 152 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 107 150 - -
Lele47g0396 152 FunFam MYB-like transcription factor 107 149 - -
Lele47g0396 152 SMART sant 104 152 IPR001005 -
Lele47g0396 152 Coils Coil 92 112 - -
Lele47g0396 152 CDD SANT 107 146 IPR001005 -
Lele47g0396 152 Gene3D - 107 150 - -
Lele47g0396 152 ProSiteProfiles Myb-like domain profile. 108 150 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0396 Lele-ChrLele47 2956156 2959103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0396 108 148 MYB Transcription Factor Family AT3G13540 65.854 3.39e-13 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele47g0396 Myb_DNA-binding 6.9e-09 CL0123