Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0368 ATGGTTGATTCTGCAATGCTATTCCTTCTTCTCTGCACTATTATTTCTTTCATCTTAGGTGTTTCCTTCGCTGACCCACCATATCCAAATTGTTCAATAAGCAGTAACTACACCAAAGGAAGCTCCTTTGAGAACAACCTTAAGAACATCCTCGGTTCTCTATCTTCCAATGCTTCAATTTCCAAATCTTACAATGTCTCTTATGGAACAAACCCAGAAAGAGTCTTTACCCTCTTCATGTGCCTCGACTATGTTTCAAATCAAACATGCCAAGACTGCATAGCCACGGCAACACAAGACATGCTTAAACTCTGTCCCCAATCAGAAGAAGCAGTTGTTTGGGAAGAGCAGTGCCAACTTCGATATTCCAACAAGAACTTCCTCGGTAAAGTCGATGTCATAGGAAAATTGGGTTTTGATAATCAACAGAATATTTCAGATCCGAAGAAGTTTGAGTCTGAGGTTAATGGGTTATTGTATAGTCTTACAGACAAGGTATCTTCCAATGTTTCTGCTAACTTATATGCTATTGGAGATACACCCTTTGAAGAGAAAACGATATATGGGTACATCAAGCAAAGCGGGGATGATTGTGGGAATTATAGCAGTGACTGGCTTGGCAATAGCGATTTTAAGTTTCTGCGTTTACTTCCTCAGGAAGAAGAGAACTCAGAAAAGTATGTATGTAAGGGTGGAATAGACAGTCATGTGATTGATCTTCATAGCTTTGGGCAGAGAGGTGAAACAGTGTTCCAAAATCACAAGATATCTGAGGATTTGCCTTATTTTGATCTTGAAACTCTGTGCGTTGCTACCAAAAACTTTTCTGATTCAAATAAGCTCGGTCAAGGAGGCTTTGGCCCTGTTTACAAGGCATGGCATCTATGGAATGAGGGAAGTGCACTGGAGTTGAAGGATCCTCTAGTAGCTGATTCATGTCCTGAAGATCAGTTTCTAGTATACTTGCATGTTGGATTACTATGTGTTCAAGAAGATGCATATGACAGACCAACCATATTCCCAGCTATGTTTTTCTTCATCATTCCCATCTTATTCCTTCACCTTGTCTCAGGTTCAGACCCTCTTTTCACTTGGTGTCCACCTGAATTCCCAGATTACACGCAGAACTCTACATTTCATAACAACCTTAAACTTCTTCTAGGTTCACTTTCCAACAACATTTCAGTCTCAGGTTTCTATGACACATCCATTGGAGAAGACACAGATAAGGTCTATGGACTTGCATTATGCAGGGGAGACATAAATTCCACAATCTGTAAGAACTGTGTTGAGAAAGCAAGCCAAGATATACTCAACAAATGTAGGAGTCAAGATGCTATAATATGGTACGATCTTTGTCAAGTAAGGTACTCATTTCAGATGTTCATTTCAAGGATGGTTTATACCGGGAAGTTTCCGGATGAAAATAATCAGGCGAAAAATGTTTCATTGGATCCAGCTCGATTCAGCCAGGTTCTGCTGTACTTAATGAATAACCTGTCCAATGAGGCTGCATTTGTCCCTTCCCGCAACATGTTTGCTTCTGGAGTAATTGAATTTTCCCAGGAAATTACAATTTATGGTCTAGTACAATGCACAAAAGACATCTCTGAAACATTATGCTATAACTGTTTGAATTCTGCATTAGGAGACCTTGGAGCTTGTTGCTCGTCCCGTGAAAGTGGGACAGTTCTTAGTCGAACTTGCGATGTGAGGTTTGGATTGTCTCAGTTCTTCAATACTTCTTCTCAGTACCTTGTGGTTTATCCAACTTCTAAAGGAGGGAAATTGAAGACATGGATGCTTGTTCTGATTATATGTGCATCAGTGTTCATATTAGCAGTTCTTACTGTTTTCTGCATTTCCTATTTCCTTAGAAAACAAGCAGCGGAAGACAGAGATGATGAAAAGAGCGAAAAGATGCTACTGCAACAATTGGCGACCCCCAAGAGTGTAACAATTACACAAGATGGAGAATTCATTAGCTCTGAAGAACTTGTGTTCATGAGTTTTGCAGCAATAAAGTTCGCCACCGATGACTTTTCTGATTCAAACAAGCTAGGACAGGGAGGTTTTGGTTCTGTGTACAAGTGTGTTCTTCCAGATGGAAATGAAGTAGCAGTTAAAAGGTTATCAAAGAAGTCTTGGCAAGGCACAGAAGAATTCAAAAATGAAGTCATTCTGATCGCAAAACTTCAGCATAAGAATCTGGTGAAGCTGTTGGGATGTGGCTTTGAAGGAGAAGAGAAGTTTCTCATATATGAATACATGTCCAATCAAAGCCTTGACAAATTTATCTTTGATTCAGAAAAACGTTCTCAGCTTGATTGGAATGCATGCTATGGCATTATCATGGGTATAGCTAGAGGATTACTTTATCTTCACGAAGAATCGAGGCTTAGAATCATTCATAGAGACTTGAAACCAAACAATATATTACTTGACCATGACATGGTTGCAAAGATATCAGATTTCGGTATGGCAAGAATTTTTTATGAAAATCAAAGTACTGCTAATACTAAAAGAGTTGTGGGTACATATGGATACATGGCTCCAGAATATGCAATGGGAGGCCTGTTCTCAGTGAAATCTGATATCTTCAGCTTCGGTGTCATCTTGCTCGAGATTATTAGTGGGAAGAAAAGTAGTGGCTTTTATGCAACTGAACTCTCCTCTAACCTTCTGGCATATGCATGGAAGTCATGGAATGAAGGGAAAGAAATGGAATTTGTGGATCCTCATTTAATGGAAGCAAGTGTTTCTTCAGAAATATTAAGGTGCATGAGCATAGGACTGTTTTGTGTACAAGAAGACCCAGAAGACAGACCGACCATGTCAGATGTTATGGTTCTGTTAGGAAGTGAATCAATGTCTCTTCCAAAACCAAAACAACCTGCATTTTCTATGGGTAGATCAGTTAAAGTTGATCCATCATTGATGACAACTTCCTCTGTGAATCATATAATGCTCTCTAGTGTTCAGCCTAGTTTAGCATTTGAGCTTCTTGAGTTTCAACATATTCTGTTGACTGTACATGTAAGTTTCATGCAAAAGATTTCAACTTTTGGGATATCAAATTATGGGTCATGA 3090 0.3922 MVDSAMLFLLLCTIISFILGVSFADPPYPNCSISSNYTKGSSFENNLKNILGSLSSNASISKSYNVSYGTNPERVFTLFMCLDYVSNQTCQDCIATATQDMLKLCPQSEEAVVWEEQCQLRYSNKNFLGKVDVIGKLGFDNQQNISDPKKFESEVNGLLYSLTDKVSSNVSANLYAIGDTPFEEKTIYGYIKQSGDDCGNYSSDWLGNSDFKFLRLLPQEEENSEKYVCKGGIDSHVIDLHSFGQRGETVFQNHKISEDLPYFDLETLCVATKNFSDSNKLGQGGFGPVYKAWHLWNEGSALELKDPLVADSCPEDQFLVYLHVGLLCVQEDAYDRPTIFPAMFFFIIPILFLHLVSGSDPLFTWCPPEFPDYTQNSTFHNNLKLLLGSLSNNISVSGFYDTSIGEDTDKVYGLALCRGDINSTICKNCVEKASQDILNKCRSQDAIIWYDLCQVRYSFQMFISRMVYTGKFPDENNQAKNVSLDPARFSQVLLYLMNNLSNEAAFVPSRNMFASGVIEFSQEITIYGLVQCTKDISETLCYNCLNSALGDLGACCSSRESGTVLSRTCDVRFGLSQFFNTSSQYLVVYPTSKGGKLKTWMLVLIICASVFILAVLTVFCISYFLRKQAAEDRDDEKSEKMLLQQLATPKSVTITQDGEFISSEELVFMSFAAIKFATDDFSDSNKLGQGGFGSVYKCVLPDGNEVAVKRLSKKSWQGTEEFKNEVILIAKLQHKNLVKLLGCGFEGEEKFLIYEYMSNQSLDKFIFDSEKRSQLDWNACYGIIMGIARGLLYLHEESRLRIIHRDLKPNNILLDHDMVAKISDFGMARIFYENQSTANTKRVVGTYGYMAPEYAMGGLFSVKSDIFSFGVILLEIISGKKSSGFYATELSSNLLAYAWKSWNEGKEMEFVDPHLMEASVSSEILRCMSIGLFCVQEDPEDRPTMSDVMVLLGSESMSLPKPKQPAFSMGRSVKVDPSLMTTSSVNHIMLSSVQPSLAFELLEFQHILLTVHVSFMQKISTFGISNYGS 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0368 1029 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Lele47g0368 1029 FunFam Cysteine-rich receptor-like protein kinase 28 27 126 - -
Lele47g0368 1029 SUPERFAMILY Protein kinase-like (PK-like) 258 297 IPR011009 -
Lele47g0368 1029 Pfam Salt stress response/antifungal 372 459 IPR002902 -
Lele47g0368 1029 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Lele47g0368 1029 Pfam Salt stress response/antifungal 485 573 IPR002902 -
Lele47g0368 1029 ProSiteProfiles Protein kinase domain profile. 681 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0368 1029 FunFam Uncharacterized protein 757 958 - -
Lele47g0368 1029 CDD STKc_IRAK 687 948 - -
Lele47g0368 1029 SUPERFAMILY Protein kinase-like (PK-like) 663 951 IPR011009 -
Lele47g0368 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Lele47g0368 1029 ProSiteProfiles Gnk2-homologous domain profile. 361 462 IPR002902 -
Lele47g0368 1029 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 373 974 - -
Lele47g0368 1029 Gene3D Transferase(Phosphotransferase) domain 1 757 961 - -
Lele47g0368 1029 Gene3D - 364 462 IPR038408 -
Lele47g0368 1029 Gene3D - 472 578 IPR038408 -
Lele47g0368 1029 Gene3D - 28 127 IPR038408 -
Lele47g0368 1029 Pfam Protein tyrosine and serine/threonine kinase 684 950 IPR001245 GO:0004672|GO:0006468
Lele47g0368 1029 Gene3D Phosphorylase Kinase; domain 1 240 318 - -
Lele47g0368 1029 Gene3D Phosphorylase Kinase; domain 1 644 756 - -
Lele47g0368 1029 ProSiteProfiles Gnk2-homologous domain profile. 470 578 IPR002902 -
Lele47g0368 1029 SMART serkin_6 681 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0368 1029 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 647 756 - -
Lele47g0368 1029 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Lele47g0368 1029 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 360 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0368 Lele-ChrLele47 2680760 2687702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0368 342 974 Receptor kinase-like Gene Family AT4G05200 43.359 6.78e-163 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele47g0368 PK_Tyr_Ser-Thr 8.5e-49 CL0016