Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0366 ATGATTGCTTTCGTCTTCTTCATCTCCATCTTCATCTTCATCTTCAACGCCAACCAATCAGCCGCCTCTGTATTCAACGATGTCAACTGCACAACCAACATCACCTTCACTCCTAACGGCACCTTCCAAAGCAACCTCGCCACCCTCCTCTCCTCCCTCTCCTCCAACGCCACAGGCGGCACCAGATTCTACAACACTACCATCCGCAGCGGCGGGGGAGAAAACACTGTATACGGCCTCTTCATGTGCCGTGGCGATGTGCCGTATCCACTGTGCAGTGAGTGCGTTAACTTCGCCACCCAAAGGATAAGCTCATCGTGTCCTTCAGCCAAGGAAGCCATAATATGGTACAACGAGTGCTTGCTCCGATATTCCTATAGGCTTATCTTCTCTTCCATGGAAGAATGGCCAAGATACCAGATCAAGATTCCGTTAGGCGACCCTGTACTTTTACGAACTCATCGCTTTTACAATACGTTGGGATCGATTTTGAATGATCTGATAGATGGAGCAGCTCAGGCTCTTGGGAAATCTGATTCCAAGTTCGGTGTTCAGCAAGGTGACGCATCTGGAAACACGGCGTTGTACGGCCTGGCTCAGTGCACGCCGGACTTAGCCGCCGGCGACTGCAAGCGGTGTGTCAGGGATGCGATAGGGGAGATTACGACGTCTTGTTGCGGAGGTAGCATCGGACAAAGTGTAATGTTCCCCAGTTGCATTGTTCGCTACGAAACGTATCCATTTTATCAGCATTCCGGCACGTCGACATCCTCGCCGACGGCAGCTAACGGAAAAAGCAATAAATTACGAACAGAAATTATTGCAATTATTGTCCCCTCGATTATTGTTCTGATGGTAGCAGTAATGGTTTTGTGCTACTACATGGTACCAAAAAATTCAAATTCAAATCCAAAGAAGAAATCGCAAAGGGCCACTGATCTCTCAGAAAACTTTGGGGTTGAAATTATTACCACAACGGATTCGTTGCAAATTGACATGGCTACAATTAAAGTAGCTACGAACAATTTTTCTGAAGGAAGTAGGATTGGCAAAGGTGGATTTGGAGAAGTTTATAAGGGAGTTCTTCTTGATGGACAAGAGATAGCTGTGAAGAGATTGTCAAGAACTTCTACGCAGGGAATTGAAGAATTTAAGAACGAGGTTTTGCTAATAGCTAAACTTCAACATAGAAATTTAGTGAGGCTACTTGGATTCTGCCTTGAAGATGATGAGAAGATACTTATTTATGAATATGTGCCTAACAAAAGCCTTAATCACTTCCTATTTGATTTTGGCATGGCAAGACTAATAACACTGGACCAGATTGAAGGAAGCACAAGTAGGATTGTTGGAACATATGGATATATGTCTCCAGAATATGCAATGCATGGATCCTTCTCGGTAAAGTCTGATGTCTTTAGTTTTGGAGTTATGATGCTCGAGATTATCAGCGGAAGAAAGAATTCTTGTTCTTATGAATCATGTCGCATCGATGATCTCCTGAGTGACGCTTGGAGAAAATGGAGGGGTGAATCAATAGAAGAATTGCTGGATCCAGCAGTGAAAGAATCGTATTCAGAACAAGAAGTGTTGAGGTGTATTCAGATTGGTTTATTGTGTGTTCAAGAAAATCCAGATGATAGGCCTACAATGGGAAACGTAGCTTTATATCTGAGCAACGTTACGGTTGAATTGCCATATCCTCTAGAGCCTGCATTTTTCATGCAAGGAAGAAGAAGACGAAGCCATAATGTTGAACATGATCCCAATTTTGATCACTCCACCAACTTCTCTGTCTCGTCCTCCATTAATGAGATGTCTATAAGTAAATTTTTCCCTCGATAA 1845 0.4369 MIAFVFFISIFIFIFNANQSAASVFNDVNCTTNITFTPNGTFQSNLATLLSSLSSNATGGTRFYNTTIRSGGGENTVYGLFMCRGDVPYPLCSECVNFATQRISSSCPSAKEAIIWYNECLLRYSYRLIFSSMEEWPRYQIKIPLGDPVLLRTHRFYNTLGSILNDLIDGAAQALGKSDSKFGVQQGDASGNTALYGLAQCTPDLAAGDCKRCVRDAIGEITTSCCGGSIGQSVMFPSCIVRYETYPFYQHSGTSTSSPTAANGKSNKLRTEIIAIIVPSIIVLMVAVMVLCYYMVPKNSNSNPKKKSQRATDLSENFGVEIITTTDSLQIDMATIKVATNNFSEGSRIGKGGFGEVYKGVLLDGQEIAVKRLSRTSTQGIEEFKNEVLLIAKLQHRNLVRLLGFCLEDDEKILIYEYVPNKSLNHFLFDFGMARLITLDQIEGSTSRIVGTYGYMSPEYAMHGSFSVKSDVFSFGVMMLEIISGRKNSCSYESCRIDDLLSDAWRKWRGESIEELLDPAVKESYSEQEVLRCIQIGLLCVQENPDDRPTMGNVALYLSNVTVELPYPLEPAFFMQGRRRRSHNVEHDPNFDHSTNFSVSSSINEMSISKFFPR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0366 614 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 23 128 - -
Lele47g0366 614 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lele47g0366 614 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Lele47g0366 614 Gene3D - 151 248 IPR038408 -
Lele47g0366 614 Gene3D - 23 127 IPR038408 -
Lele47g0366 614 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 430 - -
Lele47g0366 614 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 437 563 - -
Lele47g0366 614 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 304 418 - -
Lele47g0366 614 Gene3D Transferase(Phosphotransferase) domain 1 414 564 - -
Lele47g0366 614 SUPERFAMILY Protein kinase-like (PK-like) 330 586 IPR011009 -
Lele47g0366 614 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Lele47g0366 614 Pfam Salt stress response/antifungal 154 246 IPR002902 -
Lele47g0366 614 Pfam Protein tyrosine and serine/threonine kinase 430 554 IPR001245 GO:0004672|GO:0006468
Lele47g0366 614 Pfam Protein tyrosine and serine/threonine kinase 346 428 IPR001245 GO:0004672|GO:0006468
Lele47g0366 614 ProSiteProfiles Protein kinase domain profile. 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0366 614 ProSiteProfiles Gnk2-homologous domain profile. 138 248 IPR002902 -
Lele47g0366 614 Gene3D Phosphorylase Kinase; domain 1 302 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0366 Lele-ChrLele47 2656350 2659644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0366 5 614 Receptor kinase-like Gene Family AT4G05200 38.047 4.05e-146 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele47g0366 PK_Tyr_Ser-Thr 3.2e-12 CL0016