Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0362 ATGGCTTCCATAATTTCTTTGGCTCTGTTTTCTTTCCTTTCTCATCTCATCATAATTGTCTCCGCCAAGCAAAATGACTTCCCCGACAACCTTTACTTCGACAGATTGATCCAGTCGGAGTGCTTTGAAGATGGAAACCAGTTCAACGAAACAAGTCCCTACGACTTCAACCTCAAAAGGCTTCTTTATTATAGCCTCACTTCCGACCCAAACATCGATTATGGCTTCTACAATAAGTCTGAGGGCCAAGTCCCCAATAGAGTCAACGCAATTGGGCTCTGCAGAGGAGATGTCAAGTCAGATGCTTGTCGTAGTTGCCTCCACAATGCAACTTCGCTTCTCCTAAACAAATGCGGAAATCAAACCGAAGTCATGGGATACAGCGACGGATGCATGTTACGATACTCAGACCAGCCAATATTTGGGTCATATCAGAAACATGACTTCTCCCTTGCATATAAAAATGATGCTTATTCTGAAGAAACGAACTTCAATAGAACGGTTAATGGTCTGTTACAAAATCTAACAAAAAAAGCTGCGGCTGGTGACTCCCGTCGTAAGTTTGCAGCATCAGGAACAGATGTGGCTTTCCAAGAAACAATTTTTGGTCTTGTTCAGTGCACTCCTGATTTGTCTGAGCGAAGTTGCCAAGACTGCTTGCAGAAGGCTATCTTGGAAATCAATGGACCTTGTTGTGGGAACAGAAAAGGTGCAAGGATTGTGAAACTGAGCTGCAGTGTAAGATATGAGAAGTATCCCTTCTATGATCAAGAAGTTGTCGATTCACTACAACCATCTCTTCCTCCATTATCCACCGTTAATACAACTTCTTCGCCGGGAGGAGGAGACATCAGCAGTTCAAGAATTGTCATAATCATCTTCGTTGTTCCGGCCGTTTCATTTATCATGGTTCTCTCCTCCATGTTCGCCTATTCTCGAATTAGGAAATCAAGAAAACCCTTTGAAATTGAGCTTCAAGATAATCGAGATGAAATGACACCAATTGAGTCATTGCAATTCGACTTTTATACCATTAAACTTGCTACAGATAACTTTTCTATTGAAAATAAGCTTGGACAAGGAGGATTTGGACCAGTATTTAAGAAAAAAAAGAAAGATCCAAACCAACGAACTCATCTGAATTGTGAACTTCGATACAAGATTGTAGGAGGCATTGCTCGTGGCCTTCTTTACCTTCATGAGGATTCAAGATTACGTATTATTCATCGTGATCTCAAAACAAGTAATATCCTTTTAGATGAAGAGATGAGTCCTAAAATATCAGATTTTGGTATGGCACGACTGTTCTCCATTAATCAAACTCAAAGCAATACTAGCAGAATTGTTGGAACCTATGGATATATGGCACCGGAATATGCACTGCACGGGCAATTTTCAATAAAATCAGATGTTTTCAGTTTTGGTATGTTAGTTTTAGAAATTGTAAGCGGAAAGAGAAACAATACCGTCTTTCATGAGGAGAATTGCCATGATCTATTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACAACTTCAAATATAATAGATTCATTATTAAGTGAGGGGTCAATAAAGGAAATGACAAGATGCATCCACATTGGTTTACTCTGCGTTCAAGAAAATATAGCAGACAGGCCAACCATGGCTACCGTTGCACTTATGCTCAGCAGCCACTCATTTTCTCTTCCGTTGCCTTCACAACCTGCATTTTTGAGGAATTACAGAACTTTAACAGAGACGCATTCGGGGGAGAGCAGTTCAGGAGTAACAAGATCCATTGAACAAGACACAACTAGCCTCATTCAAGCATCAAGTGGACGAGAACATAACTCTTTTCAGCAATAA 1848 0.4042 MASIISLALFSFLSHLIIIVSAKQNDFPDNLYFDRLIQSECFEDGNQFNETSPYDFNLKRLLYYSLTSDPNIDYGFYNKSEGQVPNRVNAIGLCRGDVKSDACRSCLHNATSLLLNKCGNQTEVMGYSDGCMLRYSDQPIFGSYQKHDFSLAYKNDAYSEETNFNRTVNGLLQNLTKKAAAGDSRRKFAASGTDVAFQETIFGLVQCTPDLSERSCQDCLQKAILEINGPCCGNRKGARIVKLSCSVRYEKYPFYDQEVVDSLQPSLPPLSTVNTTSSPGGGDISSSRIVIIIFVVPAVSFIMVLSSMFAYSRIRKSRKPFEIELQDNRDEMTPIESLQFDFYTIKLATDNFSIENKLGQGGFGPVFKKKKKDPNQRTHLNCELRYKIVGGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEMSPKISDFGMARLFSINQTQSNTSRIVGTYGYMAPEYALHGQFSIKSDVFSFGMLVLEIVSGKRNNTVFHEENCHDLLSFAWKNWREGTTSNIIDSLLSEGSIKEMTRCIHIGLLCVQENIADRPTMATVALMLSSHSFSLPLPSQPAFLRNYRTLTETHSGESSSGVTRSIEQDTTSLIQASSGREHNSFQQ 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0362 615 ProSiteProfiles Gnk2-homologous domain profile. 146 254 IPR002902 -
Lele47g0362 615 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 161 369 - -
Lele47g0362 615 SUPERFAMILY Protein kinase-like (PK-like) 340 587 IPR011009 -
Lele47g0362 615 SMART serkin_6 352 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0362 615 Gene3D Transferase(Phosphotransferase) domain 1 376 561 - -
Lele47g0362 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Lele47g0362 615 ProSiteProfiles Protein kinase domain profile. 273 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0362 615 Gene3D Phosphorylase Kinase; domain 1 315 375 - -
Lele47g0362 615 FunFam Cysteine-rich receptor-like protein kinase 10 149 254 - -
Lele47g0362 615 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Lele47g0362 615 Gene3D - 34 139 IPR038408 -
Lele47g0362 615 Gene3D - 148 254 IPR038408 -
Lele47g0362 615 FunFam cysteine-rich receptor-like protein kinase 10 366 563 - -
Lele47g0362 615 Pfam Salt stress response/antifungal 156 252 IPR002902 -
Lele47g0362 615 Pfam Salt stress response/antifungal 41 137 IPR002902 -
Lele47g0362 615 Pfam Protein kinase domain 385 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0362 Lele-ChrLele47 2625050 2628495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0362 48 572 Receptor kinase-like Gene Family AT4G23280 39.564 2.94e-127 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele47g0362 Pkinase 8.2e-26 CL0016