Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0361 ATGGCTCCAGCTTATTTAGCATTGCTTCAATTTCTCTTTGTTCTTATCAAAGCCACCACCAGCCAACCAGAATTTCGATACTATTTTTGCAACAACACAGCAAAAAATAGCACCTACCAGAACAACCTCAATGCTCTTTTATCAAATCTAACTTCCAACAAACAAATAGATTATGGTTTCTACAATCTCTCTTATGGTAATTACCCAAAGAGCATCTATGCAGTTGGGTTATGCAGGGGAGATATTATGCCAGATTTTTGCAGAAGCTGCCTCAAAAATTCATCAATTTTGCTTCCACAGCTATGTCCAAATCAGAAGCAAGCTTTTGGGATCTACGATGAGTGCATGTTATCATACTCAAACACATCTATATTGGGAAATCGGGTAGATCCTATTCTTACACTCTATATGTGGAATGATAACTTTGCAACAAGTTGGAATCAGTACAATCAGGTCCTTACAGGTTTGCTGAGAAACCTAGGTAGCAGAGCTGCATCTGGTGATTTCAGTCTGAAGTTTGCTGCAGGAAATGAAGAAGGACCTGAACTTCAAAACATATATGCTGTTGTTCAGTGCACACCTAATTTGAACGAGTCAGAATGCAAAAACTGCTTGGTTTGGGCCATTTCACAAATTCCAAACTGCTGTAACAGGAGGCCAGGTGGTAGGGTTATTACACCCATATGTAACTTTAGATATGAAAGTAGCCGCTTCTATGCAGTTTCAGCTGATGTACCTTTATCAGCTCCGTCGCCATTACCGTCTCCTCCTACTCCGCCTCCTCTGCTTACATCTCCGTCATCTTCTCCTGCATCCACCAACGCAACATCTTCATCACCTCCTCCATCTGCAGCCACAACATCCTCAAAAGGAAAGAAATCACAAACTATCGTTGCCATTGTTGTGCCAACTTCTGCATTGGTGGTGGTGCCTATCTTTGTTTGGATCTGGGTAAGAGTGAGAAAGCAAGGAAGGAAATTTCCAAGTGAAACTGAAGCTGATGATGCAATTGAACAAACTGAGTCAATACAATTCGAATTTGACACCATCAAAGTTGCTACTAATAACTTCTCTGATGCAAACAAGCTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCAAGCTCTCGGACCGAAAAGAGATCGCGGTAAAAAGGTTGTCTAGGGATTCTAGGCAAGGGGACATTGAATTCAAGAATGAAGTACAATTAATGGTTAGGCTTCAACACAGAAATTTGGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAGGAAAGGCTTCTAGTATATGAGTTTCTTCCTAATAGAAGTCTTGATTACTTCATATTTGATTCTATTAGACGTGAACAACTGAGATGGGAAATACGCTACAAAATTATAGAAGGAATTGCCCGAGGCCTTCTTTATCTTCATGAAGAATCTCAACAACGAATTATTCATCGTGATCTTAAAGCAAGTAATATTCTCTTAGATGTAAAGATGAATCCTAAGATATCAGATTTTGGTTTGGCGAGACTATTTATTACAGATCAAACTCAAGCCAATACAAATAGAGTTGTGGGGACATATGGGTATATGGCACCAGAGTATGCCAGGCACGGACGATTCTCAGTGAAGTCTGATGTCTTCAGTTTCGGTGTACTAATTCTAGAGATTGTGAGTGGCCAGAAGAATGGCAGCTCTCATAACATGGAGAATGTAGAGCATCTACCAAGTTTGGCATGGAAAAGCTGGAGGAAAGGGATAGCTTCTAACATTATAGATCCCAAATTAAAATATGGTTCAATAAATGAAATAATGAGATGCATTCACATTGGTTTACTGTGTGTTCAAGAAAAAGCTGCAAACAGACCAACCTTGGCTTCCCTTGTGCTTATGCTCAGTAGCCACTCTTTCTCACTTCAAGAACCCATGAAACCTGCATTTTTTATGGATGACATAAGTTCATCAGGCAGACGATCTGGGGATTACAGAATTGTGTCGTCAACAAGCTCCAGTGAGAAAAACAGTAAATCTGTAGAAGCATTATCAGTAAATGAAGCCTCAATAACTGATATATATCCACGATAA 2070 0.3981 MAPAYLALLQFLFVLIKATTSQPEFRYYFCNNTAKNSTYQNNLNALLSNLTSNKQIDYGFYNLSYGNYPKSIYAVGLCRGDIMPDFCRSCLKNSSILLPQLCPNQKQAFGIYDECMLSYSNTSILGNRVDPILTLYMWNDNFATSWNQYNQVLTGLLRNLGSRAASGDFSLKFAAGNEEGPELQNIYAVVQCTPNLNESECKNCLVWAISQIPNCCNRRPGGRVITPICNFRYESSRFYAVSADVPLSAPSPLPSPPTPPPLLTSPSSSPASTNATSSSPPPSAATTSSKGKKSQTIVAIVVPTSALVVVPIFVWIWVRVRKQGRKFPSETEADDAIEQTESIQFEFDTIKVATNNFSDANKLGQGGFGPVYKGKLSDRKEIAVKRLSRDSRQGDIEFKNEVQLMVRLQHRNLVRLLGFCLKQKERLLVYEFLPNRSLDYFIFDSIRREQLRWEIRYKIIEGIARGLLYLHEESQQRIIHRDLKASNILLDVKMNPKISDFGLARLFITDQTQANTNRVVGTYGYMAPEYARHGRFSVKSDVFSFGVLILEIVSGQKNGSSHNMENVEHLPSLAWKSWRKGIASNIIDPKLKYGSINEIMRCIHIGLLCVQEKAANRPTLASLVLMLSSHSFSLQEPMKPAFFMDDISSSGRRSGDYRIVSSTSSSEKNSKSVEALSVNEASITDIYPR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0361 689 SMART serkin_6 357 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0361 689 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 124 - -
Lele47g0361 689 FunFam Cysteine-rich receptor-like protein kinase 28 433 635 - -
Lele47g0361 689 MobiDBLite consensus disorder prediction 249 290 - -
Lele47g0361 689 Gene3D - 24 123 IPR038408 -
Lele47g0361 689 Gene3D - 132 238 IPR038408 -
Lele47g0361 689 SUPERFAMILY Protein kinase-like (PK-like) 340 627 IPR011009 -
Lele47g0361 689 Pfam Salt stress response/antifungal 144 235 IPR002902 -
Lele47g0361 689 Pfam Salt stress response/antifungal 30 121 IPR002902 -
Lele47g0361 689 Gene3D Phosphorylase Kinase; domain 1 319 432 - -
Lele47g0361 689 ProSiteProfiles Gnk2-homologous domain profile. 131 238 IPR002902 -
Lele47g0361 689 Gene3D Transferase(Phosphotransferase) domain 1 433 640 - -
Lele47g0361 689 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Lele47g0361 689 Pfam Protein tyrosine and serine/threonine kinase 361 625 IPR001245 GO:0004672|GO:0006468
Lele47g0361 689 FunFam Cysteine-rich receptor-like protein kinase 10 319 432 - -
Lele47g0361 689 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 685 - -
Lele47g0361 689 MobiDBLite consensus disorder prediction 267 290 - -
Lele47g0361 689 MobiDBLite consensus disorder prediction 249 266 - -
Lele47g0361 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Lele47g0361 689 CDD STKc_IRAK 363 627 - -
Lele47g0361 689 ProSiteProfiles Protein kinase domain profile. 357 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0361 689 FunFam Cysteine-rich receptor-like protein kinase 10 133 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0361 Lele-ChrLele47 2619416 2622511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0361 5 689 Receptor kinase-like Gene Family AT4G21410 45.170 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele47g0361 PK_Tyr_Ser-Thr 2e-48 CL0016