Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0308 ATGTCATTTTCATGCCCTCTAACCCCAATTATCATATTCATTCCCCAACCCCACGTCTCCAAATTGACAGTTGTAACTCTCTCTCTCTCTATAGCAGTCTACTGGGCAAGATTTGACCATTGTGCTTCTCTCTCGCCTCTCCAGATGATCGATTATTTTAATGCACACCAAGTGTTTGAAGTGGGTCCTCTGAGAATTTCAAGTGGTCCCATCAAGGGCTTGGGACTGAAATTTGATTCCAAAGTACTAGGACTTTGTCTTATGCGGATTATTGGTGATGATGAAACCAATCCCTGTCTCGTCATCTCTTTCATTTCTGCTAGTTGGCTTCAAAGAAAAATGGAGGCTTGTGGGAGGATTTCTGAAGAGTGGAGCTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGATTTCATGAATCAACTTCTTGGTAACAACTGTTCAGTCCCAGAAAAACTTCTATATGAAAATTCAACTTTGGGATTTCCATGTGGGTTTTGGCCTGGACATGATTCAACAGTTGTGAGCGTCACAGGCATCAATCCCAACAACACTTCATATTTTCCTTCTAATGATGCTAATTTTTTCAGTTTCTCATCACAAGGCAGTAGCCCCAGTACTGATAGTGGTGTTAGCTACCGCCTTAATGATCCATTGACCAATTTTGATGCTGTGTCCATGGATTTTTCTTTGGGGGATGCCAAAATTGTCCCATACACTGTTGAAACCAATTATCATTTGAACCATCAGATGAATGAAAATGCTGATGAAGAGTCAGGTTTTGACCCAGTTGAGAGGGTTCTTGCTGTTGCTGACAAGAATTTTCAGGCTAATAAGGAATGTGAAGAACTAGTTTCTTCTGAACCAGTTGAAAAGAAGTCAGAGAAAAGATCTAGGATCTCATGGAAGGGACAGAAGAACAAGAGGAATGTGAAATCAAAGAAGAATACAAAATCCGAATCTGTAAGCAAAAATGAAGAGGATAATAGGAGCTTTCAAAGTCAGAGCTCAAGCAGTTGCTGCTCAGAGGATGATTCCAATGCTTCTCAGGAGCTAAATGTGGGGTCCACTTCAAGTTTAAGTCCTAAAGATTCTGCATCTCTCAAGTCTAATAATGTCAAATCATTGTCTGCTAAAAGTCCTGCCACTGATCCACAGAGCGCATATGCAAGAAGAAGAAGAGAAGGAATAAACGAAAGATTGAGAATCCTACAAAACCTTGTCCCTAATGGAACTAAGGTGGATATAAGCACCATGCTTGAGGAAGCAGTTCAATATGTGAAGTTCTTACAGCTTCAAATAAAGCTTCTGAGCTCAGATGATCTGTGGATGTATGCTCCTATCGCTTACAATGGATTGAACATTGGAATTGACCTTAACATCACACCTAAACAATCATAG 1401 0.4054 MSFSCPLTPIIIFIPQPHVSKLTVVTLSLSIAVYWARFDHCASLSPLQMIDYFNAHQVFEVGPLRISSGPIKGLGLKFDSKVLGLCLMRIIGDDETNPCLVISFISASWLQRKMEACGRISEEWSSLSGLYTAEEADFMNQLLGNNCSVPEKLLYENSTLGFPCGFWPGHDSTVVSVTGINPNNTSYFPSNDANFFSFSSQGSSPSTDSGVSYRLNDPLTNFDAVSMDFSLGDAKIVPYTVETNYHLNHQMNENADEESGFDPVERVLAVADKNFQANKECEELVSSEPVEKKSEKRSRISWKGQKNKRNVKSKKNTKSESVSKNEEDNRSFQSQSSSSCCSEDDSNASQELNVGSTSSLSPKDSASLKSNNVKSLSAKSPATDPQSAYARRRREGINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLNIGIDLNITPKQS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0308 466 SMART finulus 387 436 IPR011598 GO:0046983
Lele47g0308 466 MobiDBLite consensus disorder prediction 328 384 - -
Lele47g0308 466 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 381 430 IPR011598 GO:0046983
Lele47g0308 466 MobiDBLite consensus disorder prediction 286 391 - -
Lele47g0308 466 MobiDBLite consensus disorder prediction 286 301 - -
Lele47g0308 466 CDD bHLH_AtIND_like 382 444 - -
Lele47g0308 466 FunFam Basic helix-loop-helix transcription factor 382 439 - -
Lele47g0308 466 Pfam Helix-loop-helix DNA-binding domain 391 431 IPR011598 GO:0046983
Lele47g0308 466 Gene3D - 383 444 IPR036638 GO:0046983
Lele47g0308 466 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 254 439 IPR045843 GO:0003700|GO:0006355
Lele47g0308 466 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 383 446 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0308 Lele-ChrLele47 2218672 2220548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0308 114 457 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 39.467 2.64e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele47g0308 HLH 8.4e-08 No_clan