Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0302 ATGAGTTGCAGTGGTTGTCGTGTTCTCCGGAAACGATGCCGCGACGAGTGCATGCTCCGGCATTGCCTTCAGGGGATCCAAGACCCTCAAGCCCAAGCCCACGCCACCCTCTTCGTTGCCAATTTCTTCGGCCGTGCCGGCCTCATGTCTTTGGCCTCCGCCGTTCCCCCCTCCCAAAGACCCCATTTGTTTCAGTCGTTGTTGTATGAAGCGCTGGGACGCACCATAAACCCAGTGAATGGAGTGGTGGGGCTTCTCTGCACAGGGAAATGGCATCTCTGCCACCTGGCGCTGGAGACGGTGCTCCGTGGCGGCACGTTGAGTCCACTTCCTCCGGGTTTCTCCATTGTTGGTGGCTGCGGCAGAGGTAAATCAGTTCGGGCGGAAGATGAGAGTTTCGTGTATGCCATGAATACTTGTACCAATCACAGGAACATGAAGATGTTAAAGGGGAAGGTAATGAGTGGTTCTAATATTGATGACGTGGAGAATTCTCAAGCACGTGATCGGAGGATGCCGGAGAGAGCGAAGAAGCACCGAGCAGTGACGCCGTCCACGGAGGAGTCTGAAACGACCACGTTAGGGAGTGCTGAAAGGAGACTCCTAAGACTATTCTATTGA 621 0.5459 MSCSGCRVLRKRCRDECMLRHCLQGIQDPQAQAHATLFVANFFGRAGLMSLASAVPPSQRPHLFQSLLYEALGRTINPVNGVVGLLCTGKWHLCHLALETVLRGGTLSPLPPGFSIVGGCGRGKSVRAEDESFVYAMNTCTNHRNMKMLKGKVMSGSNIDDVENSQARDRRMPERAKKHRAVTPSTEESETTTLGSAERRLLRLFY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0302 206 MobiDBLite consensus disorder prediction 163 185 - -
Lele47g0302 206 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Lele47g0302 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 192 - -
Lele47g0302 206 MobiDBLite consensus disorder prediction 157 194 - -
Lele47g0302 206 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0302 Lele-ChrLele47 2154474 2155324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0302 1 147 AS2 family AT3G49940 59.184 4.09e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele47g0302 LOB 1.5e-23 No_clan