Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0269 ATGGAGGCGTTTAGGGGAGATGTGGATCGGGTTAAGGGTCCCTGGAGCCCTGAGGAGGACCAGTTGTTGAGGCAGCATGTGCAACGGCACGGCGCTCGAAATTGGTCGGCGATAAGCAAGGTCATCCCCGGACGATCTGGAAAGTCGTGCCGGCTCCGATGGTGCAACCAACTCTCACCGGATGTAGAGCGCGGTGCCTTCACTCCCGAGGAGGATGAGATCATTGTCAAGGCACACGCCAAGTTCGGCAACAAATGGGCCACCATAGCCAAGCTCCTCAACGGCCGTACGGATAACTCCGTCAAGAACCACTGGAACTCGACGTTGAAGCGCAAGCACTCGTCATTGGTCGGCGACGTTGAAGATCCATCGCTCCAACCAGCGAAGAAGCCGGCCACCAGAGATCGATCGCTCACGATTCCACCGGTATTAGCGAGTCATTGTTGCAGCCCGAGCAGCCAAACTGGATCTGATGTAAGCGATTCCGGTCATCAGGTAGTCTCTAATCCTCCGACTCTGATTCAGCCTGAATCAAAACCGCTGGATGCGATCTTGAACAACGATCTCTCAACAAAACTCACTCTGTCTCCTCCTGGATTCGAGTCGATGGAGTTACGGAAGGTTAAAGATTCAGTCGCTATCGCAGAGCATGAGAAGGCATTAACAGCAGCTGTATTATCATCAACGGAGAAGAAGCAGAGTGGAATCATGACATTGGGGCCAGAGTTAGTGGCAGTGATGAAAGAGATGATAAGGGATCAAGTGAGAAATTACATGGCGGCGTGTGAGAGAGAGGGCTGGAATTTGAAAAATACTAGTACTTTCAGATGA 831 0.5211 MEAFRGDVDRVKGPWSPEEDQLLRQHVQRHGARNWSAISKVIPGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIVKAHAKFGNKWATIAKLLNGRTDNSVKNHWNSTLKRKHSSLVGDVEDPSLQPAKKPATRDRSLTIPPVLASHCCSPSSQTGSDVSDSGHQVVSNPPTLIQPESKPLDAILNNDLSTKLTLSPPGFESMELRKVKDSVAIAEHEKALTAAVLSSTEKKQSGIMTLGPELVAVMKEMIRDQVRNYMAACEREGWNLKNTSTFR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0269 276 SMART sant 11 60 IPR001005 -
Lele47g0269 276 SMART sant 63 111 IPR001005 -
Lele47g0269 276 MobiDBLite consensus disorder prediction 149 175 - -
Lele47g0269 276 FunFam Transcription factor MYB44 66 112 - -
Lele47g0269 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 58 IPR017930 -
Lele47g0269 276 FunFam MYB transcription factor 12 63 - -
Lele47g0269 276 MobiDBLite consensus disorder prediction 149 178 - -
Lele47g0269 276 CDD SANT 14 56 IPR001005 -
Lele47g0269 276 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Lele47g0269 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lele47g0269 276 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele47g0269 276 PANTHER MYB PROTEIN-RELATED 12 158 - -
Lele47g0269 276 Pfam Myb-like DNA-binding domain 15 73 - -
Lele47g0269 276 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Lele47g0269 276 CDD SANT 66 109 IPR001005 -
Lele47g0269 276 Gene3D - 11 63 - -
Lele47g0269 276 Gene3D - 65 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0269 Lele-ChrLele47 1895133 1895963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0269 9 264 MYB Transcription Factor Family AT5G67300 46.403 1.68e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele47g0269 Myb_DNA-bind_6 1.7e-18 CL0123