Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0262 ATGTTTGTATATAGTATTGCGTTATACATGTTCAACAATAGGATGTTCGTTTCATTTCATTGTCTTGACCTTGTAATGTTAAATGTAGTTACGATTCACCGGCTTGATATGCAGAACGAGATCAGCTCAAAGTTCAAACACTTCAAATCCCTTCTCAATCACATAAAGCTTATTTGTTTGTCCATGTCGATAACTGTGATCCAAGGTCAATCTCTTGAGGTTACTGGTTGCAGTAAGTTGAGGGATACAGAATGGATTTCAAGGCAAGATCCCTATGTCTGCCTCGAATATGCTAGCACCAAGTTCCGCACCAGAACTTGCACAGACGGTGGCAAAAATCCCACATTTCAAGAGAAGTTTATCTTTCCGCTAATTGAAGGGCTTAGGGAAATTAAAGTTGTGGTTTGGAATAGCAATACAATTACCTTTGACGACTTTATCGGGAGTGGAAAACATGCAGGGGAGGTAAAAGTCATAATGCATTATGCAAATGCCAAAGTAAGCTACGTTTCCCATTGTGTTATACAGACAATTGGTCTTAATTACCTTGAAGTAGTTAATGATTTCACGTGTTTGTATCATGATTTGCAGAAACCAACTTCAAGTTATGCTCCATCAGCACCACCATACATGAATTCAAGTGTCCAATATTCCGCACCTCCTCCTGCTTCTTATCCTCAGCCTGCATCTGTACCTTATACACCGCCGCCACCTGCAGTTTCTTACCCTCCACATCCTCCAACAGCTTACCCCTCTTCATCACCCTATCCGTCATACCAATCTGGCTATCCGCCACCAGAGGGACCGCCGCTACCTTATCCTCCTCCGAGCACTTACCCCCCTCCTCCCAGCACCTATCCTCCTCCTCCGAATCAACCACCACCTGCGGCTTATCCTCCACATCCATATCCACCATCTCGACCAGCCTCTGCATATTATCCTCCAGACGAGACTACGAAGAAAAAGATGAAGGCTTTTCAAGATTCTTCCTTTCTCTTCGATTCTCTCTACTGTCATGAGCCCAAGCTGGACGACGAACAAGACGAACCAGAACAACAAGAAACAGAGTTTTCAGATGAAACTGATCTCACCAGCAATAATGCTTCTCTGCTTCCTCTTGTTCTGTTGGAGCAAGATTTGTTCTGGGAAAACCAAGAACTCATCTCTCTCTTCACCAAAGAACAGCAACAACATCAAGAACCTGCTTACTTCAATCTGGGTAATCTGGAATTTTCAGACTCTTCTCTCTCATTGGCTCGTCGTGAAGCAGTGGAGTGGATTCGTAAGGTGGGGGATACCAAGTATGTGTTCGATGGCAAGACGATTCTGAGAATGGAGCTTCTGGTTCTGTCGACACTAAAATGGAAGATGCACCCAGTGACACCTTTATCGTTCTTAGATCACATCATTAGAAGGCTTGGATTGAAAACCCATCTTCACTGGCAATTTCTCAAGCGTTGTGAGCATCTTCTATCAGCACTCTCAGATTCAAGATTCGTAGGCTATCTTCCTTCTGTGTTGGCCACGGCCACAATGCTTCTTATTATAGAGCAGATACAGCACAATGATGCAGCCGAATACAAAAAACAACTACTGGGTGTGCTTAAAATGAACAAGGATAAAGTAGAGGAGTGTTATAAGGCAATTCTCCAGGCGTCGCATGGTAATAATAATAATAAAAAGAAGAGAAAGTATGATGAAAGAAAAATAATGGATGGTGGATTTGGGAGTGATGAAGGATCCAACGGTTCGTGGAGAGTGGGGTCGTCTTCATCATTGTGTTCTTCATCACCACCAGAGTCTCTCTTCAAGAGGACCAGAACTCAGCAGCAGCAACAACAGACTAGTAATATGAAGTTGTCCGCACTGAATCGGGTTGGTGTTGCAATTGTTGTTTCATCTCCTTGA 1908 0.4334 MFVYSIALYMFNNRMFVSFHCLDLVMLNVVTIHRLDMQNEISSKFKHFKSLLNHIKLICLSMSITVIQGQSLEVTGCSKLRDTEWISRQDPYVCLEYASTKFRTRTCTDGGKNPTFQEKFIFPLIEGLREIKVVVWNSNTITFDDFIGSGKHAGEVKVIMHYANAKVSYVSHCVIQTIGLNYLEVVNDFTCLYHDLQKPTSSYAPSAPPYMNSSVQYSAPPPASYPQPASVPYTPPPPAVSYPPHPPTAYPSSSPYPSYQSGYPPPEGPPLPYPPPSTYPPPPSTYPPPPNQPPPAAYPPHPYPPSRPASAYYPPDETTKKKMKAFQDSSFLFDSLYCHEPKLDDEQDEPEQQETEFSDETDLTSNNASLLPLVLLEQDLFWENQELISLFTKEQQQHQEPAYFNLGNLEFSDSSLSLARREAVEWIRKVGDTKYVFDGKTILRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCEHLLSALSDSRFVGYLPSVLATATMLLIIEQIQHNDAAEYKKQLLGVLKMNKDKVEECYKAILQASHGNNNNKKKRKYDERKIMDGGFGSDEGSNGSWRVGSSSSLCSSSPPESLFKRTRTQQQQQQTSNMKLSALNRVGVAIVVSSP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0262 635 SMART Cyclin_C_2 460 597 IPR004367 -
Lele47g0262 635 CDD C2 71 149 - -
Lele47g0262 635 MobiDBLite consensus disorder prediction 343 364 - -
Lele47g0262 635 FunFam CYCLIN D32 459 547 - -
Lele47g0262 635 Pfam C2 domain 62 149 IPR000008 -
Lele47g0262 635 ProSiteProfiles C2 domain profile. 42 169 IPR000008 -
Lele47g0262 635 SMART C2_3c 61 168 IPR000008 -
Lele47g0262 635 SUPERFAMILY Cyclin-like 383 458 IPR036915 -
Lele47g0262 635 Gene3D C2 domain 70 163 IPR035892 -
Lele47g0262 635 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 149 323 - -
Lele47g0262 635 Pfam Cyclin, C-terminal domain 460 571 IPR004367 -
Lele47g0262 635 MobiDBLite consensus disorder prediction 572 617 - -
Lele47g0262 635 Gene3D - 433 458 - -
Lele47g0262 635 Gene3D - 459 549 - -
Lele47g0262 635 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 73 156 IPR035892 -
Lele47g0262 635 MobiDBLite consensus disorder prediction 582 617 - -
Lele47g0262 635 MobiDBLite consensus disorder prediction 244 316 - -
Lele47g0262 635 SUPERFAMILY Cyclin-like 461 570 IPR036915 -
Lele47g0262 635 MobiDBLite consensus disorder prediction 244 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0262 Lele-ChrLele47 1834657 1843651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0262 429 551 Core Cell Cycle Gene Families AT4G34160 63.710 6.11e-46 165