Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0261 ATGGATTCTGTGACTGCTGATACAGCTAATTTACCTCCTACTAAAGATCCACCTACTTCACCTTCTGTTAAAGATCTCGAAGGACAAACTGCTTCCTCTGCAGTCTCTGGGCAAGAAAATTCTTCACATGTGACATCACCTAGGCAATCTTCCGCTGGCATTTCCTCATGGGCTAGAAATCTGAAAATTCCCCAGCCATTTTCTGGCCCTCATGATGATCCAGCAAGTGAAAATTCTGGGAAATCTACTTTTGCACGCTTCACTAATAGTTTAACAATGCGGTTGTCTCCAAAACCATCTTCATCAGATGACAACTCCAATGAAGCTGCTGCTCAATCTAATTTGATTGAAAGTTTTGCAAAGGGTCTGGTCGACTCTTCTAAAAATGCTGTGAAAGCTGTGCAGGTCAAGGCCCGACATGTTGTTTCTCAGAATAAACGGCGATACCAGGAGGGAGGATTTGATCTAGATATGACATATATCACGGAAAACATCATAGCTATGGGATTTCCTGCTGGTGACATGAGCTCTGGGTTCTTTGGTTATGTAGAAGGGCTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAGACCCATCATAAGGGTAAATACAAAGTATACAATCTTTGTTCTGAGAGGCTGTATGATGCATCATTATTTGAGGGGAAGGTGGCCAGTTTCCCATTTGATGACCATAATTGCCCACCAATGCAACTGATTATATCATTTTGTCAAAGCGCTTACGCATGGTTGAAGCAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTGAAGTTCTTCCCAACTGCTGAGGAGTCCATTGACTACTACAACCAGAAAAGGTGTTTCGATGGAAAAGGACTTGTTCTGCCAAGTCAGATTAGATACGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGCGAAAATCCTCCTGCCCGCAGATGCATGCTTAGGGGGTTCCGACTTCACAGGTGTCCTTACTGGATCAGGCCTTCTATAACTGTATCAGATCATAGTGGTGTCTTGTTCTCAACTAAAAAGCATCCAAGAACCAAGGATCTTAATCCAGAAGAGTTTTGGTTCAGTGCACCAAAGAAAGGAGTGATGGTCTTTGCATTGCCTGGGGATCCTGGTCTTACAGAGGTAGCCGGGGACTTCAAGATTCATTTTCATGATCGTCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACCGAAAACAGGAAAATATTGAACACCGGTGATCTTGATGGTTTTGACAAGAGAAAATTACCTTCACCTGGATTTCTGGTTGAGGTGGTGCTTGTGGATTATAATGGCAATGTCACGACACCCAAACCTGAAACTGTACCCAATAGTTCAGATGAGAGGTCAAGTAGTATTCCTACCCCAGTTGATGCAAGCACCACAACTCCAAAAGCTGAAAAAGAGTCAGAGAATCGTGATAAAGAGGATGATGTGTTTTCAGATGGCGAGTCAGAGGATTCTACTTCAAGAAGCAGCAGGCAGGCTAAAGCAGCTTCTGTAGCAGCTACTAATCCTAACTCTACCACAGGATCTGAGACCAAAACTTCAAGTGAGATGACAAGTTTAACGCGTGGCACGGAACAAATTTCTTTAGGACCTTCGAGCATGACTCCGATTCCTAGTGGTAGTAAGCCAAAAAGTGAAGATGCAAGCACAATGGCCAGTGTGGAAGCTCCCAGCTCAGAAAGTGAATTTAAGGCGATGGCTGCAGATGCTTCTGTGTTTACGTTTGGGGATGATGAAGACTATGAAAGTGAGTGA 1854 0.4277 MDSVTADTANLPPTKDPPTSPSVKDLEGQTASSAVSGQENSSHVTSPRQSSAGISSWARNLKIPQPFSGPHDDPASENSGKSTFARFTNSLTMRLSPKPSSSDDNSNEAAAQSNLIESFAKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGLYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLIISFCQSAYAWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNPEEFWFSAPKKGVMVFALPGDPGLTEVAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTGDLDGFDKRKLPSPGFLVEVVLVDYNGNVTTPKPETVPNSSDERSSSIPTPVDASTTTPKAEKESENRDKEDDVFSDGESEDSTSRSSRQAKAASVAATNPNSTTGSETKTSSEMTSLTRGTEQISLGPSSMTPIPSGSKPKSEDASTMASVEAPSSESEFKAMAADASVFTFGDDEDYESE 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0261 617 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Lele47g0261 617 MobiDBLite consensus disorder prediction 1 82 - -
Lele47g0261 617 MobiDBLite consensus disorder prediction 464 493 - -
Lele47g0261 617 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Lele47g0261 617 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Lele47g0261 617 MobiDBLite consensus disorder prediction 463 598 - -
Lele47g0261 617 MobiDBLite consensus disorder prediction 522 590 - -
Lele47g0261 617 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Lele47g0261 617 MobiDBLite consensus disorder prediction 494 521 - -
Lele47g0261 617 MobiDBLite consensus disorder prediction 23 62 - -
Lele47g0261 617 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 572 - -
Lele47g0261 617 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Lele47g0261 617 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Lele47g0261 617 MobiDBLite consensus disorder prediction 90 109 - -
Lele47g0261 617 SMART PTEN_C2_2 331 459 IPR014020 -
Lele47g0261 617 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Lele47g0261 617 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0261 Lele-ChrLele47 1830271 1834626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0261 4 617 Protein tyrosine phosphatase (PTP) family AT3G19420 65.329 0.0 834