Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0258 ATGGAATACACCATCTCTTTCTTTGTTCTTTCATTCTTGTTATCTTCTTCCTTGTTTCACTCATCAGTCTCAGCCTATTCTCCTTCCAATTATGACTACTCTCCTCCCACCTACTACTACCACTACCACCACCAGCCGCCTCCGCCACGGCCGCTGTCCCGGCTGGAGAAAGCTCGGCGGGTGCTCCTGAAATTCGCCACCACAATCGACGACTCCAATTCCTTTACCAAAAACTGGCATGGTCCCAACCCTTGTGAGTTCGAAGGAGTTAAATGTGCAACTTATCCAAATTCAAGTGAGAAAGCCGTCTCAGGATTAAATTTCAACCAAGCTGGTTTCTCTGCTCGTCAAGGTTCAAACTTGGGTCTCTCCGGAATCCTCGACTCCATCCCAGAATTAACTTTCTTCCATGTCAACTCCAACAATTTCTCAGGACAAGTCCCCACACAAATCACTAAATTCCCATTTTTCTTCGAGCTCGACTTAAGCAACAACAAGCTCCAAGGTAATTTCCCAAGGGATGTTCTTTCTTCTAAGCAACTTGTTTTCGTAGATCTCAGGTACAATGATCTCACTGGACCAGTCCCTCGAGAACTCTTCAACATGGATCTCGATGTCATCTTCATCAACAACAACAAATTCAGCAGCAACCTTCCATGGAATTTCGGGAACACACCTGCGAGATACCTCACGTTCGCCAACAACAAGTTCACCGGCCCAATCCCAAGTAGCATAGGAAATGCGTCAAAGACGTTGACCGAAGTTCTGTTCTTGGGAAACCAGTTTTCTGGGTGTTTGCCGTACGAGATTGGGTTCCTGAAAAAGGCCATAGTCTTTGATGTGAGCAAGAACTCATTGACAGGTCCAATCCCAGAATCGTTTGCTTGCTTGAAGAAGATTCGGTTCTTGAATTTAGCTCACAACAAGTTCTATGGTACTGTTCCAGAATCAGTGTGCGAGCTTCATGGAATACGCAACGATGGGAATCTTACCTTAACGGATAACTATTTCACTGACGTTGGACCTAAATGCAAGAAGCTGATAAAATCGAAGGTCCTTGAGGTGAGCCAGAATTGCATAGAGGGGATTCCCAATCAGAAATCGCCAGAAGAATGTTACAAGTTTTTGTATTACGTGAAGCCATGTCCAAATGAAAGGTCTCTGAAGCTTGTTCCATGTAAGAAACACCATCATCACAAGCATCATGAAACGGCGCCGGCTCCTGCGCCTGTGACTTACGAGTCTCTGAAGCCGACACGGCATCGTTTCATGTGA 1275 0.4557 MEYTISFFVLSFLLSSSLFHSSVSAYSPSNYDYSPPTYYYHYHHQPPPPRPLSRLEKARRVLLKFATTIDDSNSFTKNWHGPNPCEFEGVKCATYPNSSEKAVSGLNFNQAGFSARQGSNLGLSGILDSIPELTFFHVNSNNFSGQVPTQITKFPFFFELDLSNNKLQGNFPRDVLSSKQLVFVDLRYNDLTGPVPRELFNMDLDVIFINNNKFSSNLPWNFGNTPARYLTFANNKFTGPIPSSIGNASKTLTEVLFLGNQFSGCLPYEIGFLKKAIVFDVSKNSLTGPIPESFACLKKIRFLNLAHNKFYGTVPESVCELHGIRNDGNLTLTDNYFTDVGPKCKKLIKSKVLEVSQNCIEGIPNQKSPEECYKFLYYVKPCPNERSLKLVPCKKHHHHKHHETAPAPAPVTYESLKPTRHRFM 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0258 424 Pfam Leucine rich repeat N-terminal domain 58 92 IPR013210 -
Lele47g0258 424 Gene3D Ribonuclease Inhibitor 228 390 IPR032675 -
Lele47g0258 424 Gene3D Ribonuclease Inhibitor 55 227 IPR032675 -
Lele47g0258 424 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 219 314 - -
Lele47g0258 424 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 413 - -
Lele47g0258 424 SUPERFAMILY L domain-like 58 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0258 Lele-ChrLele47 1806928 1808202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0258 54 376 Leucine-rich Repeat extension Gene Families AT4G13340 41.846 2.95e-75 248