Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0241 ATGCAAGGTAACAGAAGGACTCTTGGGCCCTTTCCAGAAATTGTAAGTATGATGCAGGAGCCCAGTTCTAGTGGCACTGATATAAATCAGCAGACTTCCTTGAATCACATGCAAAATCCAGTTGATGCTCGGTTGTCAGATTTTCTGGGATCCTCTGGTGAGATTGCATGTTTACGCACCAGTGGTCCTAATGTTCAGAACTTTGATGGATGGAATGCTGGTGAACCTAGTTCTAGTGCGAATCTTCACAGTCAAGTCAATAATGATGGGCTAAAAGCAGAACATGGTTGGTCTTCGTGTGGTGCTTCTACTGAGAATGTTCTCAGACCAGAAGAACGGCAATTTGATCCAAATAATGTAACTTTCCCTGGTAGCTCGAATACCAGCCTACGTGGAAATCAATCCAGAGTTCAGCCTTCCTTCTTGCAATGTTCCAGCTCCAATCATAGAACCCAGAATGCAGCTTTAAATATGGGTTCCATTGCTAGCCCTGCTAATCATGGGAAAGGAACAGAACCTTGCAGCAGTGATAGTATTCACAATACATATGGATTCAATAGTAAGCATACATCATTTGGTAGTGCTTCATGCGATCATATAGGAACTTCATCTGGACGCTCTGGTTACATTGTTGGGGGAGATAATGATAATTCAAGCTCTTTAGTTAATTGGGGTTCTTCCTGCAAGAGAAAGGCTCTTGAAAGTACTTCTGGGCAAGTGTGTACTGGAGGAAGTTCAAGCTCTTTTCTAGAAGCTGAAAGCAGTTGCTGGCCTACTGGGACTCCCAATTCTGATATTGCTTCCAGCAGGTTAAATGTGTCTAGACCTTCTGAGGATATTTCTATTAGTAATCCTCCAGTAGAGCAGAACCCAAGAAATGAGATGAGGCAAAGAGCTTCTGATGCATTCCCTTTGGTAGGAGTTATGGGAAATGTGAACAGGCCTCTGAGAAACTTTGATAGGAGGTTGAATTATCCACAGCAACAGGAACCTAGGCATCCTAATCATTCTTCATCCCGCCAAACGCCTACCTCTCGCACATTTAATGATTCTCTAGAATTAAGGTTAACAGCTGGAGTTACAGCAACCAGTTCTAGTGCTCCTCAGTGTCAGTCACATGTTACGCATATCCCTGGTTTGCCAGGGAACACAGATCCTTTTCCTTGGAGTGGAGCTTCTAGTTCAAGAGAAGCCAGTTCATCTACTTCTTATAACTCTGCAGAAAGAGAACTTCGGGAAGAATTGAACTTAAGAATTTTTCCAAGGGACAATACAGAGCACCCCATCCTTGCGCCTTCATCTTCTGGACTTGACCCTACAATTTGGCATATGTCATCTGGCAATGGGAACAATTCTGGTAGTGTACCTCCTCCACCTTGGATTGGATCCAGTTCAAGTGTCAACGCATTACCTAACCCGAGCTGGATTGTTCCTCATGAAGTTCCAATGCAGAGCCAGCAAGGATTATCAGAGTTCAGTCCATGGTCCTTTTTTCCGTCAATGAACTCAGGATCTGACGTTCATAATGTTCACTCTGCCTCGTCTTCTACATCTTCTGGTCCTCCTTCCTTTACTCCAGACATGAGAAACCACCAATCATATCCAAGATTAGCGTCATTGATGGAGAGAAGAGCATTGCAATGGAAACTGTCTTATGCTGAATATCAAGTTCATGCCTTTCTTATCAAGGGAAGCTTGGTTTTGACCCCTACCTATGGTAAAGTAGGCTGGATTTTGTGCCTGGATTATATGCTCTTTGACCCTTTCATATATCATGGTATGGCTGAACTGCATGATAGGCACAGGGACATGCGCCTTGATGTTGATAACATGTCTTACGAGGAATTGCTGGCATTGGAGGAGCGCATTGGAGATGTGAGCACCGGATTGAGCGAGGATACCATTATAAGGTTGATGAAACATCGGATCTATGTGTCTGTAATGACAGAGTCTTCTACAGATCTGGAACCTTGTTGTGTTTGTCAGCAACATGATGGAGAATCAAAAGCTCTATCAGTTGAACCGAAACAACTGTCTTTAGACATTAGCTTTGTTTCTTTAGATGAACTTGCTGCTGCTTATGAAGGACTGGATTTTCCCATCTGTTGGATGGGAAAGGAAGGGAAAGGAAAATTAAGAAAAAATAAGGTGGAAAAAGACAAAGGGAGTAAAGAAATGGTGCTTGAGTAA 2190 0.4311 MQGNRRTLGPFPEIVSMMQEPSSSGTDINQQTSLNHMQNPVDARLSDFLGSSGEIACLRTSGPNVQNFDGWNAGEPSSSANLHSQVNNDGLKAEHGWSSCGASTENVLRPEERQFDPNNVTFPGSSNTSLRGNQSRVQPSFLQCSSSNHRTQNAALNMGSIASPANHGKGTEPCSSDSIHNTYGFNSKHTSFGSASCDHIGTSSGRSGYIVGGDNDNSSSLVNWGSSCKRKALESTSGQVCTGGSSSSFLEAESSCWPTGTPNSDIASSRLNVSRPSEDISISNPPVEQNPRNEMRQRASDAFPLVGVMGNVNRPLRNFDRRLNYPQQQEPRHPNHSSSRQTPTSRTFNDSLELRLTAGVTATSSSAPQCQSHVTHIPGLPGNTDPFPWSGASSSREASSSTSYNSAERELREELNLRIFPRDNTEHPILAPSSSGLDPTIWHMSSGNGNNSGSVPPPPWIGSSSSVNALPNPSWIVPHEVPMQSQQGLSEFSPWSFFPSMNSGSDVHNVHSASSSTSSGPPSFTPDMRNHQSYPRLASLMERRALQWKLSYAEYQVHAFLIKGSLVLTPTYGKVGWILCLDYMLFDPFIYHGMAELHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLSEDTIIRLMKHRIYVSVMTESSTDLEPCCVCQQHDGESKALSVEPKQLSLDISFVSLDELAAAYEGLDFPICWMGKEGKGKLRKNKVEKDKGSKEMVLE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0241 729 MobiDBLite consensus disorder prediction 361 378 - -
Lele47g0241 729 MobiDBLite consensus disorder prediction 274 293 - -
Lele47g0241 729 MobiDBLite consensus disorder prediction 361 409 - -
Lele47g0241 729 MobiDBLite consensus disorder prediction 274 295 - -
Lele47g0241 729 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 224 663 IPR045191 GO:0061630
Lele47g0241 729 MobiDBLite consensus disorder prediction 111 138 - -
Lele47g0241 729 MobiDBLite consensus disorder prediction 387 406 - -
Lele47g0241 729 MobiDBLite consensus disorder prediction 118 138 - -
Lele47g0241 729 MobiDBLite consensus disorder prediction 325 346 - -
Lele47g0241 729 MobiDBLite consensus disorder prediction 508 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0241 Lele-ChrLele47 1694601 1698691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0241 18 671 C3H Transcription Factor Family AT2G15530 31.676 1.06e-61 218