Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0240 ATGTCTGATCAATCAAATTCAGATAACAGTACTGAAGTCAGTATGGAGAAATCCTTGAGAGAGAAGAAGAGAGATCTTAGCACCGATGAAGCAGATGATCATCGTCGTGAAGCTCATTCCTTATCAGAGAGAGAAAGAAGGAAGAAGATGAGGCTCTACATGAGAGAACTTGAAGATTTGGTCCCTTCTCTTCATGATGTTAAGGCAGACAAGGCAACCATTGTTGAAGAAACCATGAAGTACATTAAAACCCTAGAAGACATTGTTGAGAAGCTGGAGAAAATGAAGAGAGAGAAACTCGGATCTGCTTTAAACTCTGCTAATAATCCCACTGATGGAGTATCTTCTTCCTCCATGGCCACTCCTGCAGACACATCGGTTCTGCAAAACCCGATCGGGTGTCAGACTTGGATTTTTCCAAATGTGGTGGTGGGAATTTGTGGAGGAGAAGCTCAGTTTAGTGTGTTCTTTCCCAAGAATGAAGAACTGTTCAGTGCCATCTTTAATGTGCTTCATAAGCACAATATTAAGATTTTGTCTGTCAGCATTACTTCTAATGATACTAAAAGCTCCTATAAGATTCAAGCAACTGCAAATGAGCAGAATTCGGAAGATCAAGTTTCAGAGGAATTTTCATTTGAGGAAACATGCAAGGAAGCGGCAAGAGAGATATATCTTCTCTCTCCTATGTGA 693 0.4055 MSDQSNSDNSTEVSMEKSLREKKRDLSTDEADDHRREAHSLSERERRKKMRLYMRELEDLVPSLHDVKADKATIVEETMKYIKTLEDIVEKLEKMKREKLGSALNSANNPTDGVSSSSMATPADTSVLQNPIGCQTWIFPNVVVGICGGEAQFSVFFPKNEELFSAIFNVLHKHNIKILSVSITSNDTKSSYKIQATANEQNSEDQVSEEFSFEETCKEAAREIYLLSPM 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0240 230 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 18 226 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele47g0240 230 SMART finulus 40 91 IPR011598 GO:0046983
Lele47g0240 230 MobiDBLite consensus disorder prediction 103 122 - -
Lele47g0240 230 MobiDBLite consensus disorder prediction 1 44 - -
Lele47g0240 230 MobiDBLite consensus disorder prediction 14 44 - -
Lele47g0240 230 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 98 IPR036638 GO:0046983
Lele47g0240 230 Pfam Helix-loop-helix DNA-binding domain 35 86 IPR011598 GO:0046983
Lele47g0240 230 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 34 85 IPR011598 GO:0046983
Lele47g0240 230 Coils Coil 75 95 - -
Lele47g0240 230 CDD bHLH_AtbHLH_like 39 93 IPR045239 -
Lele47g0240 230 Gene3D - 28 99 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0240 Lele-ChrLele47 1688115 1688993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0240 14 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 28.906 1.53e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele47g0240 HLH 1.1e-10 No_clan