Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0226 ATGTGTACAGCTGGCATCCCTTTCCACGTCACTCCCCAAACCCTATATAAACAAACTCGGCCTTCATTCTATCCAAAATGCGCCAAAGACCACAACCAGCAGGACAACACTTACCAATTCCACTCTCATATCCACTTGACTCACCGGAACATGTCTTCCTCCAAGCGATCGAAGTTCGCCGGAACTCCGATCACCTCTAACTCCACTCAGCCACCGCCTAACTTCTTCTACCACGACCACGAACACTCCGTCATCGTTGAGGCACTCACCAATGTCGTCGTCGGTTCCACCTACAGCACTATCGCGGCCACCACCTCCAGCGATCTCATCCAAGAGATTCGATTTCCTCCCACCTTTGACTATTCCTGTTCAGTATCCGCAGCCACCTCGGCTCCAATTGGAATTGCTCCGACCATGGCCGTCGAGACTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGCTGCAAATTTTTTCCCGAGGAGAAAAAGAAAACTGGAGGGAGAAGGAAGACGGCGACGACGTCATCGAAGAAGAAGAAGTACAGAGGAGTGCGACAGAGGCCGTGGGGAAAATGGGCAGCCGAGATCCGAGACCCGAGAAGGGCGGCCCGGGTTTGGTTGGGGACGTTCAATACCGCAGAGGAAGCGGCTCGCGCATACGATAAAGCGGCGATTGAATTTCGCGGGCCGCGAGCGAAGCTCAATTTCCCGTTCCCCGATAACTCGCTGAGCGACTCGAATTCCCAAACAGAGCATATGGAGGTAGAACGCTCGGAATCCGTGTTGGAGCAAGCAGAGGAAGGAAATAGAAATTCAAATCCTGGGAATTATTATGAAGATGTTTGGACGATGGGAATTGGGAGTAGTAAGAAAAATGAATTCTTGGATGGACTTGGAGATCCAGAATTTCAGCAGTGGATGACGATGATGATGGATTTTGGAGGAGATTCCTCGGACTCTGCTACTGCTAATAGCCAGAGTCCTTATAGTTGGTGA 996 0.51 MCTAGIPFHVTPQTLYKQTRPSFYPKCAKDHNQQDNTYQFHSHIHLTHRNMSSSKRSKFAGTPITSNSTQPPPNFFYHDHEHSVIVEALTNVVVGSTYSTIAATTSSDLIQEIRFPPTFDYSCSVSAATSAPIGIAPTMAVETCGECKIEGCLGCKFFPEEKKKTGGRRKTATTSSKKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFNTAEEAARAYDKAAIEFRGPRAKLNFPFPDNSLSDSNSQTEHMEVERSESVLEQAEEGNRNSNPGNYYEDVWTMGIGSSKKNEFLDGLGDPEFQQWMTMMMDFGGDSSDSATANSQSPYSW 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0226 331 Gene3D AP2/ERF domain 179 238 IPR036955 GO:0003700|GO:0006355
Lele47g0226 331 PRINTS Ethylene responsive element binding protein signature 181 192 IPR001471 GO:0003700|GO:0006355
Lele47g0226 331 PRINTS Ethylene responsive element binding protein signature 203 219 IPR001471 GO:0003700|GO:0006355
Lele47g0226 331 Pfam AP2 domain 180 229 IPR001471 GO:0003700|GO:0006355
Lele47g0226 331 SMART rav1_2 180 243 IPR001471 GO:0003700|GO:0006355
Lele47g0226 331 MobiDBLite consensus disorder prediction 312 331 - -
Lele47g0226 331 MobiDBLite consensus disorder prediction 315 331 - -
Lele47g0226 331 MobiDBLite consensus disorder prediction 238 276 - -
Lele47g0226 331 SUPERFAMILY DNA-binding domain 180 238 IPR016177 GO:0003677
Lele47g0226 331 CDD AP2 179 237 IPR001471 GO:0003700|GO:0006355
Lele47g0226 331 FunFam Ethylene-responsive transcription factor 2 179 238 - -
Lele47g0226 331 MobiDBLite consensus disorder prediction 250 264 - -
Lele47g0226 331 PANTHER DNA-BINDING DOMAIN 156 266 IPR044808 GO:0003700|GO:0009873
Lele47g0226 331 ProSiteProfiles AP2/ERF domain profile. 180 237 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0226 Lele-ChrLele47 1572907 1573902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0226 54 247 AP2-EREBP Transcription Factor Family AT4G34410 41.892 4.36e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele47g0226 AP2 1.1e-15 CL0081