Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0188 ATGCTGGCACGGTTCTTCTCCCAGGAGCTTATATCAGGGTTAGCTATTGTCATGCAATGGTATGCAATATGCCATCGTGACTTGAAGTTGGAGAACACCTTGTTAGATGGAAGTCCAGCTCCACGTTTGAAGATTTGTGATTTTGGGTGCTCAAAGTCCTCAGTGCTCCATTCACAACCAAAATCTACAGTTGGTACTCCTGCATATATCGCTCCTGAAGTGTTACTGAAGAAGGAATATGATGGCAAGAAGCAAAGGCTTAAAAGGCTTGTGGCATTGATTGCAGACGTGTGGTCTTGTGGTGTAACCTTATATGTCATGTTGGTTGGCGCATATCCTTTTGAGGACCCTGATGAACCAAAAAACTTCCGCAAGACAATACATAGGATATTGAATTTCCAGTACTCAATTCCTGACGATGTTCGTATATCTCCTGAATGCTGTCATCTGATATCAAGGATCTTTGTTGCTGACACTTCACAGATAGTTTCTGAGGCTACAATTCCTGCGGCTGGGACTCAGTCTCTCAACCAATATCTTACAGGCAGCTTGGATATTGATGATGACATGGATGAGGACCTGGAGACAGATCCCGACGACCTTGATAGCGACAGCAGTGGGGAAATAATCTATGCTATGCAACTCTTCATTCTTGGTCAAATTGCATGCCTGAATCTGTTTGGGATAAGCTCTGTTGAAATTTGGTGGTTTTTGCATTTTATAGCTTTCCTTCCTCTCTAA 741 0.4305 MLARFFSQELISGLAIVMQWYAICHRDLKLENTLLDGSPAPRLKICDFGCSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKKQRLKRLVALIADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTIHRILNFQYSIPDDVRISPECCHLISRIFVADTSQIVSEATIPAAGTQSLNQYLTGSLDIDDDMDEDLETDPDDLDSDSSGEIIYAMQLFILGQIACLNLFGISSVEIWWFLHFIAFLPL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0188 246 Pfam Protein kinase domain 3 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0188 246 SUPERFAMILY Protein kinase-like (PK-like) 3 160 IPR011009 -
Lele47g0188 246 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
Lele47g0188 246 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0188 246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 23 35 IPR008271 GO:0004672|GO:0006468
Lele47g0188 246 PANTHER SERINE/THREONINE KINASE 3 168 - -
Lele47g0188 246 SMART serkin_6 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0188 Lele-ChrLele47 1337924 1342364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0188 3 170 CBL-interacting serine-threonine protein kinases AT5G10930 41.143 1.94e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele47g0188 Pkinase 1.1e-27 CL0016