Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0185 ATGGACGCAGCCAATCAGCAGATCCCCACTCCTTTCGAGTCACTTCGAAACATCACATCCAAGTTCACTTTCACGGGTCTTAACCTCAGGGACGTGGTTGTCCTCTCTGGAGGGCACACGATTGGATTTGCAGAGTGTTTTACGTTCAAAGGGAGGCTGTTCGACTTCAAAGGGTCGGGCAAACCCGATCCAGATATGGATTCGGTGCTGCTGTCGGGTTTACAGAGAAGGTGTCCTAACAGGAAGTCCTCCGATGCAAACCTGGCTGCGCTCGATACTGCCTCGTTTTCCAGATTCGACAACGCTTATTACAGCAACCTGGTTAAGAACACGGGCCTCCTCCAATCTGATCAAGTTCTTACTTCTGATGCCACCACTGCTGATTTGGTGAATTACTATAGTCAGAGCCAGTTCGCCTTCTTCAATGACTTCTCTGCCTCCATGGTTAAACTCAGCAGTGTTGGTGTTCTTACAGGCCAGAACGGCCAAGTTAGACTCAAGTGTGGCTCTGTTAATCAAGATCAATTAACATATATAAAGCTCTCTCGTTGA 552 0.4819 MDAANQQIPTPFESLRNITSKFTFTGLNLRDVVVLSGGHTIGFAECFTFKGRLFDFKGSGKPDPDMDSVLLSGLQRRCPNRKSSDANLAALDTASFSRFDNAYYSNLVKNTGLLQSDQVLTSDATTADLVNYYSQSQFAFFNDFSASMVKLSSVGVLTGQNGQVRLKCGSVNQDQLTYIKLSR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0185 183 PANTHER PEROXIDASE 72-RELATED 2 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 Gene3D Peroxidase, domain 2 9 151 - -
Lele47g0185 183 ProSitePatterns Peroxidases proximal heme-ligand signature. 31 41 IPR019793 -
Lele47g0185 183 PRINTS Haem peroxidase superfamily signature 31 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 PRINTS Haem peroxidase superfamily signature 92 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 FunFam Peroxidase 9 151 - -
Lele47g0185 183 SUPERFAMILY Heme-dependent peroxidases 2 172 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 PRINTS Plant peroxidase signature 106 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 PRINTS Plant peroxidase signature 30 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 PRINTS Plant peroxidase signature 90 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 PRINTS Plant peroxidase signature 146 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 Pfam Peroxidase 4 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 ProSiteProfiles Plant heme peroxidase family profile. 1 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele47g0185 183 Gene3D - 2 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0185 Lele-ChrLele47 1320318 1320869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0185 3 169 Peroxidase AT1G49570 59.172 1.24e-66 206