LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele47g0151	ATGTCAACCATCTCCGACCATTCCTCCGGCAACTTTCTTCTGCATGAACTCACTAAGACCACCCCCTTTCTGGGTTTAGAACTCTACATCGTTATTTGCGTTTTCCTCTTCATCTTTGTCTTTCTTGTGCTCCTGATCTTCCTCTGCATTCGCCGGAATCAAAGAAGCTCCACGAGGCCCAGTACGCTAGCCAGCCAAAGCTCCGGCGTGATTCCGTTGGTCTACAAGGAGATCGTGGAGGTTGAAGCCTTGGATCTTCTTGATATCGAAGAGAAAAATCTTAAGGTTGAAGGTCCTGCTGATCTGAGGAGGAAGAAGCAGCCGGAATACGACGAGGAGATCAATGTTGGATTTCGCAGAGGAAAACAGAGGAACGATGAGAATGATACCGTCGACGGTCTGAAGATAGGGTGGGGCCGTTGGTACAGCTTGGAGGAGCTTAAGCTTGCGACACGTGGATTCGCCGACGAGAATGTGATAGGAGAAGGAGGTTATGGAATTGTATACAGAGGAATTCTTCAAGATGGTTCAGTAGTTGCAGTGAAGAAACTTCTGAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAAGTTGAAGCTATTGGAAAAGTAAAGCATAAGAATTTGGTGGGTTTAATAGGATATTGTGCAGAAGGTTCTCAAAGGATTCTTGTTTATGAATTTGTTGAGAATGGAAACTTGGAGCAGTGGTTGCATGGTGAGATAGGGCCTGCTAGGGCTAGCCCATTAACATGGGATATACGTACGAGGATCGCCATAGGGACGGCAAAAGGGCTAGCCTATTTGCATGAAGGGTTAGAACCCAAAGTCGTGCACCGAGATGTGAAATCTAGTAACATCCTTCTCGACAAAAGATGGAACGCCAAGGTATCGGACTTTGGACTGGCCAAACTCTTGGGACCCGAGAAAAGCTACGTGTCTACACGCGTAATGGGGACATTTGGATATGTTTCGCCTGAGTATGCTAGCACTGGCATGCTTAATGAAGGTAATGATGTGTATAGTTTTGGAGTTCTACTGATGGAGATAATCACTGGAAGAAGTCCCATTGATTATTCTAGATCACCAGCGGAGATGAACTTGGTTGACTGGTTCAAGGGAATGGTGGCGAGTCGTCGTGGGGATGAGCTAGTAGATCCTTCGATCGAGATTAAGCCCTCTCCGAGATCACTGAAGCGAGCTTTGTTAGTTTGTTTGCGCTGCATAGATATGGATGTCTGTAAGCGGCCAAAGATGAGTCAAATAGTTCATATGCTTGAGGCAGATGATTTTCCCTTTCGTTCTGAACTTCGAGCAGCTAGAGAGAAAGATCCTGTGGCCTCTCATGCATCTGTTTCCAGCAAAATTTCATATCTACCAAAGCATGTGGACTCAGTTGAGAGATCAAGATGGCGATGA	1422	0.4606	MSTISDHSSGNFLLHELTKTTPFLGLELYIVICVFLFIFVFLVLLIFLCIRRNQRSSTRPSTLASQSSGVIPLVYKEIVEVEALDLLDIEEKNLKVEGPADLRRKKQPEYDEEINVGFRRGKQRNDENDTVDGLKIGWGRWYSLEELKLATRGFADENVIGEGGYGIVYRGILQDGSVVAVKKLLNNKGQAEKEFKVEVEAIGKVKHKNLVGLIGYCAEGSQRILVYEFVENGNLEQWLHGEIGPARASPLTWDIRTRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGPEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDELVDPSIEIKPSPRSLKRALLVCLRCIDMDVCKRPKMSQIVHMLEADDFPFRSELRAAREKDPVASHASVSSKISYLPKHVDSVERSRWR	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele47g0151	473	Pfam	Protein kinase domain	155	425	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele47g0151	473	Gene3D	Phosphorylase Kinase; domain 1	120	229	-	-
	Lele47g0151	473	SMART	serkin_6	154	434	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele47g0151	473	ProSitePatterns	Protein kinases ATP-binding region signature.	160	183	IPR017441	GO:0005524
	Lele47g0151	473	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	278	290	IPR008271	GO:0004672\|GO:0006468
	Lele47g0151	473	FunFam	Probable serine/threonine-protein kinase At1g01540	134	229	-	-
	Lele47g0151	473	FunFam	Putative receptor-like serine/threonine-protein kinase	230	442	-	-
	Lele47g0151	473	Gene3D	Transferase(Phosphotransferase) domain 1	230	440	-	-
	Lele47g0151	473	PANTHER	OS01G0323000 PROTEIN	10	449	-	-
	Lele47g0151	473	CDD	STKc_IRAK	160	428	-	-
	Lele47g0151	473	SUPERFAMILY	Protein kinase-like (PK-like)	139	434	IPR011009	-
	Lele47g0151	473	ProSiteProfiles	Protein kinase domain profile.	154	420	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele47g0151	Lele-ChrLele47	1087013	1089790	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele47g0151	32	430	Trihelix Transcription Factor Family	AT1G70460	40.342	1.79e-89	286

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Lele47g0151		Pkinase	4.1e-46	CL0016