Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0143 ATGACATTGTTGCAAAGGCAAAGAGACAGTATGAAATGGCAACAACCACAGCTTCATCATCATCATCAGAACCAGAGCAGCTACTTTTCTGGGAGTGGGTTTGACGGTGGGTTCTCGTCTCTGCAAGTTCCGAATTCTGGGTCGTTGATGATGATGAATGGCGGTGTTGACGGCGCTTGTTCTGGGCTTGGTGAGGTGGTGCCTAATGTCGGCTCGGTGAAGCCAGACCCGGGTTGGGAAAACGGGTGGCCCGAATTGGGTAAGGTCGACTTGCCTGGTAGGGGATACGTGTCCTCTGGATTTAATGTGAGCTCTGCAATTTCAAGGACTTCTAGCTGCCCGCCGTCTGTGGCGGCGTCGGCGGCAGCAACCAGGACGACGACGATGATGACGGAGAAGATGAGATCGACAAGTGGGAGAGAGAGCATCAAGAAGAGGAAATCTGATAAAGTTCAGATCCCCAAGGGTGTTGCAGAAAATGAGAAGAACAAGAAAAACAAAACAAGTGGTGATGAAGGGGATCAATCCAAAGTCACAACAGATAATAATAACAACAACAATGACAAGGACAGAGAAACATCTGCGGAATCTTCGAAAGATAATTCAAAAGCTTCTGAGGTTCAAAATCAAAAGCCTGACTACATTCATGTTCGAGCACGTCGTGGACAAGCCACTGATAGCCATAGCTTAGCCGAAAGAGTTAGAAGGGAAAAAATTAGCGAGAGAATGAAGTACTTGGAAGGTTTGGTTCCAGGTTGTAACAAAATCACAGGAAAAGCTGGCATGCTCGATGAAATCATCAATTATGTTCAATCTCTTCAACGACAAGTAGAGTTTTTGTCGATGAAACTAGCTGCTGCAAACCCAAGGATCGAATTCAACGTTAACGATCTGTTTACCAAGGAGGTTTTTCCTGCTTGTGCTCCTACAAGTTTTCCAGCCATAGATATGACACCAAATCCTTCATATCTTCAGTTTGATCCAACACAACAACATGTAGCTTCATGTTCCGGATTAGATATGGGCATAATAAACCCTACAGATTTGGGGTTTCGAAGGACCACTAGTGGCTTTGTTTCCTTGCCACACGAAACGTTTCTTGACTCATCCTGTTTCAATCCATTCACAGGCCTAATTGAAGCTAGCAATCTAAAGATGGAGATGTGA 1167 0.4516 MTLLQRQRDSMKWQQPQLHHHHQNQSSYFSGSGFDGGFSSLQVPNSGSLMMMNGGVDGACSGLGEVVPNVGSVKPDPGWENGWPELGKVDLPGRGYVSSGFNVSSAISRTSSCPPSVAASAAATRTTTMMTEKMRSTSGRESIKKRKSDKVQIPKGVAENEKNKKNKTSGDEGDQSKVTTDNNNNNNDKDRETSAESSKDNSKASEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAANPRIEFNVNDLFTKEVFPACAPTSFPAIDMTPNPSYLQFDPTQQHVASCSGLDMGIINPTDLGFRRTTSGFVSLPHETFLDSSCFNPFTGLIEASNLKMEM 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0143 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 221 292 IPR036638 GO:0046983
Lele47g0143 388 CDD bHLH_AtBPE_like 213 298 - -
Lele47g0143 388 Pfam Helix-loop-helix DNA-binding domain 227 274 IPR011598 GO:0046983
Lele47g0143 388 MobiDBLite consensus disorder prediction 1 27 - -
Lele47g0143 388 MobiDBLite consensus disorder prediction 107 231 - -
Lele47g0143 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 223 273 IPR011598 GO:0046983
Lele47g0143 388 MobiDBLite consensus disorder prediction 137 174 - -
Lele47g0143 388 SMART finulus 229 279 IPR011598 GO:0046983
Lele47g0143 388 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 125 325 IPR024097 GO:0006355
Lele47g0143 388 MobiDBLite consensus disorder prediction 184 199 - -
Lele47g0143 388 MobiDBLite consensus disorder prediction 213 231 - -
Lele47g0143 388 FunFam Basic helix-loop-helix transcription factor 220 292 - -
Lele47g0143 388 Gene3D - 220 295 IPR036638 GO:0046983
Lele47g0143 388 MobiDBLite consensus disorder prediction 107 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0143 Lele-ChrLele47 1010716 1013013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0143 136 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 49.115 1.95e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele47g0143 HLH 3.5e-05 No_clan