Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0118 ATGGCTTCCTCAAGCGGAACATCTTCAGGTTCAGGTTCAGGTTCGGCGTCCCTGGTTCATAACTCTGGTTCAGAGGAGGATTTGCAGGTTTTGATGGATCAGAGGAAGAGGAAGAGGATGATATCGAATCGTGAGTCAGCAAGGCGATCTCGGATGAGAAAACAGAAGCATCTTGACGATCTGGTGGCTCAAGTGTCTCAGCTGAGAAAAGAGAATCAGCAGATTCTCACAAGCGTGAATCTCACAACAGAACAGTACGTAAGAATTGAATCTGAAAACTCTGTTCTTCGAGCTCAAGCGAGTGAGCTGAGTAACAGGCTGGAATCTCTGAACGAGATAATCGATTTCTTGAATGCTAACAACAATGGAGGTTTTGGAAACAGCTTCAACATGGAGCCCAACAACAATGGAGGATTCTTGAATCCAATGAACATGGGATATCTGAACCATCCGATTATGGCATCTGCAGATCTATGGCCGGATTTGTATCAGAGTCAGTGGAGAGATTAA 510 0.449 MASSSGTSSGSGSGSASLVHNSGSEEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVSQLRKENQQILTSVNLTTEQYVRIESENSVLRAQASELSNRLESLNEIIDFLNANNNGGFGNSFNMEPNNNGGFLNPMNMGYLNHPIMASADLWPDLYQSQWRD 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0118 169 Pfam bZIP transcription factor 35 93 IPR004827 GO:0003700|GO:0006355
Lele47g0118 169 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Lele47g0118 169 SUPERFAMILY Leucine zipper domain 35 87 IPR046347 GO:0003700|GO:0006355
Lele47g0118 169 MobiDBLite consensus disorder prediction 1 28 - -
Lele47g0118 169 MobiDBLite consensus disorder prediction 1 55 - -
Lele47g0118 169 Coils Coil 86 120 - -
Lele47g0118 169 MobiDBLite consensus disorder prediction 29 55 - -
Lele47g0118 169 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Lele47g0118 169 FunFam Basic region/leucine zipper protein 33 115 - -
Lele47g0118 169 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Lele47g0118 169 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 156 - -
Lele47g0118 169 Gene3D - 33 88 - -
Lele47g0118 169 Coils Coil 51 78 - -
Lele47g0118 169 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0118 Lele-ChrLele47 871867 872429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0118 31 157 bZIP Transcription Factor Family AT4G34590 57.143 1.30e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele47g0118 bZIP_1 1.1e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1289 45 22732521 22732997 Lele47g0118 47 871867 872429 hybridization
Lele46g1387 46 20750013 20750559 Lele47g0118 47 871867 872429 hybridization