Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0087 ATGGCCATTAGAAAACCCAGCAAGCTTCCTCAGACTGCAATTCTGAAACAGATCCTTAAGAGATGTTCAAGCTTAGGGAAGAAAAATGGCTATGATGATGAAGGCCTCCCTCTTGACGTCCCAAAAGGACATTTTGCTGTGTATGTTGGTGAGAACAGAAGTAGGTATATTGTGCCTATCTCCTTCTTGACTCACCCAGAATTTCAGTCCCTTCTTCGTCAGGCTGAAGAAGAATTTGGCTTCGATCATGATATGGGTCTCACTATCCCTTGTGAGGAAGTTGTTTTCAGGTCCCTAACATCAATGCTTAGATGA 315 0.4317 MAIRKPSKLPQTAILKQILKRCSSLGKKNGYDDEGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0087 104 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Lele47g0087 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0087 Lele-ChrLele47 599021 599335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0087 1 99 Calmodulin-binding Proteins AT3G43120 44.554 4.74e-21 80.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1323 45 22994599 22994913 Lele47g0087 47 599021 599335 hybridization