Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0066 ATGTTTTCTTCTTCCTCTAATTCCATCGTCTCCGCCCAACCCTTCTTTCCATCTTCTCATCTCAAAGCCTCCAAAGCCCAGAAAGCTTATTTTCCCGGGAAAGTCTCTGCCTCTTACACTGCGGCTGAAAATAGAGGAAACAGAGCATTCGCAACCATGGCTTCCTCTGCCTCTGCTTCTCTGTACGATGTGCTTGGGATCTCAATGGGTGCTAGCGGCACCGAGATAAAAGCCGCTTTCAGGAAGCTCGCGAGAACGTGTCATCCTGATGTGGTGGCCATGAATCAGAAGGAAACCTCGGCCAACGAGTTCATGAAGATACATTCGGCTTATTCCACGTTGTCGGATCCCAGCAAGCGGGCTCAATATGACAGACAACTCCATGGCCATAACCCCAGAAGGCCTCTTACTTCTTCAAACATAGCTTCCATGTCTGGGTATCGTACCAGATATGCTCACTCTGGAATGAGCTGGGAGACCGATCAGTGTTGGTAG 495 0.497 MFSSSSNSIVSAQPFFPSSHLKASKAQKAYFPGKVSASYTAAENRGNRAFATMASSASASLYDVLGISMGASGTEIKAAFRKLARTCHPDVVAMNQKETSANEFMKIHSAYSTLSDPSKRAQYDRQLHGHNPRRPLTSSNIASMSGYRTRYAHSGMSWETDQCW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0066 164 PRINTS DnaJ domain signature 99 119 IPR001623 -
Lele47g0066 164 PRINTS DnaJ domain signature 80 95 IPR001623 -
Lele47g0066 164 PRINTS DnaJ domain signature 62 80 IPR001623 -
Lele47g0066 164 SMART dnaj_3 59 119 IPR001623 -
Lele47g0066 164 CDD DnaJ 62 116 IPR001623 -
Lele47g0066 164 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Lele47g0066 164 Pfam DnaJ domain 61 124 IPR001623 -
Lele47g0066 164 SUPERFAMILY Chaperone J-domain 57 131 IPR036869 -
Lele47g0066 164 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Lele47g0066 164 Gene3D DnaJ domain 47 149 IPR036869 -
Lele47g0066 164 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 10 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0066 Lele-ChrLele47 471179 471673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0066 53 124 C2H2 Transcription Factor Family AT1G74250 40.506 2.59e-09 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1442 46 21207875 21208213 Lele47g0066 47 471179 471673 hybridization