Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0048 ATGACCGTTGAGAGGGGAAATGTGTTGGTGGGGATTAGAATCGATAGTCAAAGCAGACAGCTTTTAAACTGGGCTCTTGTCAAAGTTGCTCAACCTGGAGATTGCGTTGTTGCAGTTCATGTGGTCAAATGTGCAGGTCATGTTTCAAAAAGCAAGCCCCTGCTGGATAAGTATTTAGAGGTTTATGAGGGCCTATGTGACGTGAAAAAAGTAAGTCTCGTAGGTCAAATCTTCAGAGGGAGATCTGTTCGAAACATTCTCGTGAGAGAGTCAAAGAATAGTGCTGCTCTGGCTCTAGTGGTTGGTGGTCGTGCTGCCACAGCTAAACATTGTGCCAAACGACTCCCACCCACCACAGATGTTGTAGCCATCCACGATGGAAGAATTGTCTTCAGCAGGTGTACCAATCTTAAACTACCTGCAGGTCTTATACAAGATCCAAGGCCTAGTCTCACAAGCATGGACGACAAAGAATTCCTGTCTGAATATGGAGACTCCGAGGTTGGCACTGTGAAATCAATATGTTATGAAGAGACAAGAGAAGATGTCCCAGAATTGAACAAAGAAGTATTTGAAGGTGTTAAAGGGATCAAGAAAGTGTGTTCAAGAGCAATATCTATGTTTGTAGGTGACACTTGTGAGCAGAAACTAGGATGGCCCTTGCTCCGAAGAGTTAATTCAGAAATCATGTCAGAGATTTCTCTTGCAAGGAATTTGTCTGTAGTACAGTGGGTAATGAACTTACCAGATCGTTCGCCAAAGAAAAGTTTTTTCTTTTCATCCACAGAAGAAAGTCTCTCAGAAAGAAGCATCAGTGATATTGAGGATCACACACAGAAAAACAGTTCCTTTTCTTCATCTTTTGAGCTACCAAAGGAATTGGAGGGGATTTTGGACGTGAATTCATTCGATTTCAAGTGGTTTAACTTTGAGGATCTCAAGTCGTGGACTTCTCATTTCTCTTCAGGAAATCTGATTGGTAAAGGTGGGAGTAACCGTGTGTACAAAGGGATTCTTCCTGATGGAAAACCTATTGCAGTCAAAGTTTTAGAGTCATCAAAAGAAGCTTGTAAAGATTTTGCACAGGAAGTGGAAATAATATCCTCTTTGAAGCACAAATACATAACCCCTTTGCTTGGAATTTGCATTGCAGTAGATGCTTTAATCTCTGTCTATGAGTTTTTCCCCAAAGGAAGCTTAGAGGAAAATTTACACGGTGAGAACAAGGATGGATCCATATTGTCATGGCAAGCTAGATTTAATATGGCAGTTGGTATAGGAGAAGCCCTCAGTTACCTTCACAATGAAAACTCAAAGCCTGTTATACACAGAGATGTCAAGTCTTCAAATATTCTTCTCTCCCATGGGTTTGAACCACAATTGACTGATTTTGGACTTGCAATATGGGGACCAACGAGTTCATATTTTCTGACACAAGATGTAGTGGGAACATTCGGATATCTTGCTCCTGAATACTTCATGTATGGAAAATTAAGTGACAAGATAGATGTGTATGCCTTTGGTGTCGTTCTTCTTGAACTAATTTCAGGAAGGAAACCAATCAGTTCCGAGATTTGCAAAGGACAGCAAAGTTTGGTCGCCTGGGCAAAACCAATAATAGATAGTGGGAACGTTAAAGACTTATTGGACTCCAATTTAGAGGAAAAATTTGATGAAGTCCAAATGCAGAGAATGGTTAAGGCAGCAAATCTGTGCATTTCAAGGGGTGCTAGGCTTCGTCCTAAGATGAACCAGATACTGAAGATCCTGCAGGGAGAAGAAAGAGATGAGAGTTTGTGGAGTTCACAGAGGTTTGATGATGATCATACAGAAAACCAGGACAACATAGACGACGAAGTGTATCCAAATTCAAGTGCAGAGTTACATCTAACTCTTGCATTGCTTGATGTTGACGAGGATTCAGCATCATATAGCAGTAGTACAGAGCGGAGCTACAGTCTTTCTGTGGAAGAACACTTGAAAGAAAGATGGAGCAGACCATCCAGTTTTGATTAA 2016 0.4112 MTVERGNVLVGIRIDSQSRQLLNWALVKVAQPGDCVVAVHVVKCAGHVSKSKPLLDKYLEVYEGLCDVKKVSLVGQIFRGRSVRNILVRESKNSAALALVVGGRAATAKHCAKRLPPTTDVVAIHDGRIVFSRCTNLKLPAGLIQDPRPSLTSMDDKEFLSEYGDSEVGTVKSICYEETREDVPELNKEVFEGVKGIKKVCSRAISMFVGDTCEQKLGWPLLRRVNSEIMSEISLARNLSVVQWVMNLPDRSPKKSFFFSSTEESLSERSISDIEDHTQKNSSFSSSFELPKELEGILDVNSFDFKWFNFEDLKSWTSHFSSGNLIGKGGSNRVYKGILPDGKPIAVKVLESSKEACKDFAQEVEIISSLKHKYITPLLGICIAVDALISVYEFFPKGSLEENLHGENKDGSILSWQARFNMAVGIGEALSYLHNENSKPVIHRDVKSSNILLSHGFEPQLTDFGLAIWGPTSSYFLTQDVVGTFGYLAPEYFMYGKLSDKIDVYAFGVVLLELISGRKPISSEICKGQQSLVAWAKPIIDSGNVKDLLDSNLEEKFDEVQMQRMVKAANLCISRGARLRPKMNQILKILQGEERDESLWSSQRFDDDHTENQDNIDDEVYPNSSAELHLTLALLDVDEDSASYSSSTERSYSLSVEEHLKERWSRPSSFD 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0048 671 MobiDBLite consensus disorder prediction 643 671 - -
Lele47g0048 671 MobiDBLite consensus disorder prediction 654 671 - -
Lele47g0048 671 PANTHER OS08G0249100 PROTEIN 208 614 - -
Lele47g0048 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Lele47g0048 671 SMART serkin_6 320 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0048 671 MobiDBLite consensus disorder prediction 600 619 - -
Lele47g0048 671 Pfam Protein kinase domain 322 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0048 671 Gene3D Transferase(Phosphotransferase) domain 1 395 607 - -
Lele47g0048 671 Gene3D Phosphorylase Kinase; domain 1 259 394 - -
Lele47g0048 671 CDD USP_Like 7 104 - -
Lele47g0048 671 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 289 394 - -
Lele47g0048 671 SUPERFAMILY Protein kinase-like (PK-like) 303 590 IPR011009 -
Lele47g0048 671 FunFam Putative receptor-like serine/threonine-protein kinase 395 606 - -
Lele47g0048 671 ProSiteProfiles Protein kinase domain profile. 320 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0048 Lele-ChrLele47 351143 354362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0048 308 593 Trihelix Transcription Factor Family AT1G70460 42.955 4.12e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele47g0048 Pkinase 1.7e-40 CL0016