Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0041 ATGGATAGCTGGTTGGGTCGACCTATGAGAGCCCTTATTTTCCTCAACGGTCTCTTGCGGAAGGCATTGTCGAGGTTGATAAGTTGCTGCATGAGTGCTTCGTTGTTTTGTTTCTCGAGAGAGATGTCGAAGGAAGTGAGCGAAGAAGGCCAAACCCACCACCATGGCAAAGACTACGTCGACCCCCCACCGGCTCCTCTCATTGACATGGCCGAGCTCAAGCTCTGGTCCTTCTACAGAGCCCTCATCGCCGAGTTCATCGCCACCCTTCTCTTCCTCTACATCGCCGTCGCCACTGTCATTGGCCACAAAAAGCAGAGTGGCCCCTGCGACGGAGTGGGCCTCCTCGGCATAGCCTGGGCCTTCGGTGGCATGATCTTCGTCCTTGTCTACTGCACCGCCGGTATCTCTGGTGGCCACATCAATCCTGCTGTCACATTTGGTTTGTTCTTGGCGAGGAAGGTGTCACTTATCCGAGCTTTGGCGTACATGGTGGCTCAGTGCTTGGGTGCGATTTGCGGTACTGGGTTGGTGAAGGCGTTCATGAAGCACTCGTACAACTCACTCGGTGGTGGGGCTAACGAAGTGAACTCCGGCTACAGCAAAGGCACCGCTCTCGGCGCTGAGATTATTGGTACCTTTGTTCTGGTCTACACCGTCTTCTCGGCCACCGATCCCAAGAGAAGCGCCCGTGACTCTCATGTTCCTGTTTTGGCTCCATTGCCAATTGGATTTGCTGTTTTCATGGTTCACTTGGCTACCATCCCCATCACTGGCACAGGGATCAACCCCGCAAGGAGCTTGGGTGCTGCTGTTATCTACAACAACGGCAAAGCTTGGGACGACCACTGGATCTTCTGGGTTGGTCCATTTGTGGGAGCATTGGCTGCGGCAGCGTATCATCAGTACATTCTGAGAGCAGCGGCCATTAAGGCATTGGGATCGTTCAGAAGCAACACCAGCAACTAA 969 0.5418 MDSWLGRPMRALIFLNGLLRKALSRLISCCMSASLFCFSREMSKEVSEEGQTHHHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFIATLLFLYIAVATVIGHKKQSGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRALAYMVAQCLGAICGTGLVKAFMKHSYNSLGGGANEVNSGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNGKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNTSN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0041 322 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 47 311 IPR034294 -
Lele47g0041 322 FunFam Probable aquaporin PIP1-2 65 320 - -
Lele47g0041 322 PRINTS Major intrinsic protein family signature 159 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 PRINTS Major intrinsic protein family signature 208 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 PRINTS Major intrinsic protein family signature 284 304 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 PRINTS Major intrinsic protein family signature 244 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 PRINTS Major intrinsic protein family signature 122 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 PRINTS Major intrinsic protein family signature 80 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 TIGRFAM MIP: MIP family channel proteins 84 300 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 ProSitePatterns MIP family signature. 140 148 IPR022357 -
Lele47g0041 322 Gene3D Glycerol uptake facilitator protein. 65 322 IPR023271 -
Lele47g0041 322 Pfam Major intrinsic protein 73 300 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g0041 322 SUPERFAMILY Aquaporin-like 71 306 IPR023271 -
Lele47g0041 322 CDD MIP 80 304 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0041 Lele-ChrLele47 311763 313450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0041 42 322 Major Intrinsic Protein MIP AT4G35100 90.391 0.0 522