Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0037 ATGAACATCATCACGCAAAGCCTGTCCGAGAGATTGAGGCCCCTTGTGGGTTTGAATGGCTGGGACTACTGTATTCTTTGGAAACTAAGCCAAGACAAAAGGTTTCTTGAATGGATGGGATGCTCTTGTGCTGGGACTGAAGGTAGCCAAAATGGTGGAGAAGAACTTCTTTTCCCTGTTTCTTCAGCTGCTCAATGCAGAGATACTATGTTTCCTCATCCCAGAACAAAGTCCTGTGATTTACTTTCCCATCTTCCCATTTCCATAAGCTTAGATTCTGGGATTCGTGCAGAGACACTATTGTCCAATCAACCCACTTGGGCGAACTATTCCAATAGTTTAGACCCAAACGCTTTGGAAGAAACAATTGGAACCCATGTTTTGATTCCTGTGCCTGGGGGTCTAGTTGAGCTGTTTGTGACAGAGCAGGTGCCGGAAGATCAACAGGTGGTCGATTTCATCACAGCCCACTGCAATATGGATATGAGCTTCGACCTTGACGTGAATTCGATCAGTCATATGCAACCAGATATTAATCCACTTTTAGGAGATGAGAATGATGGGAATGCAATAGCATCAGAGACTTCAAGTCTTCCCCCACATGATCAATGCAATTCGCCAGTGAACTTGATGCAGCAATATAGCTACAGCAACCCACATAGTAACACGATGAAAAGTGACGGCATTTTTGAAGATTCCCAAGGTTCATTCCTATTGAACAAAAGCCAGAAATTTGGGGAGCCTATTGATAAGAAGGAGCAGCAAGGGGACGATAAGGATTTGATCAAACATCTAGTGGGAAGAATTTCCAAGCTAGACAGAGCTTCGATTCTCGGGGACGCAATTGAATACGTGAAGGATTTGCAGAAGCAGATGAAAGAGCTGCAAGATGAGCTCGAGGAACATTCAGAAATGGATGAACAAGAAGCACTGGATAATGTTGCTGGGGTTGAAATGGGACCAAAGGCCGATCAAATGAAGACTCAAAATGGGTTTCATCTGGGGAAATCAGGGAACGGCCATATCTGGAAGCAAAAACAAGAGTTCAATGCTCCATACGATAAGCAAACACAACAAATGGAGCCGCAAGTGGAGGTGGCAGTGATAGAAGGGAATGAATTGTATGTGAAGTTGTTCTGCGAGCACAGACCTGGAGGGTTCGCGAAACTGATGGAAGCATTCTACGCTCTGGGGTTGGAAGTCATGCATGCAACAGTGACCAGCCACAAAGGCCTCGTCTCCAATGTTTTCAAAGTAGAGAAGAAAGAAGCTGAAATGGTGAAAGCTGACGAGGTAAGAGAGTCATTGATGGAACTTATGAGGAGCCCATGCAGAGTGGGGAATCATGAGATGATTATCGTGAATGTGGCAAGGGAGTATCGTCAGCAAGAACAAGAACAACTTCAACTTCATAACCGCCACGTTGCTGCTTATAATAACCCCCACCATTTACACCACATTCATACTTAG 1470 0.4469 MNIITQSLSERLRPLVGLNGWDYCILWKLSQDKRFLEWMGCSCAGTEGSQNGGEELLFPVSSAAQCRDTMFPHPRTKSCDLLSHLPISISLDSGIRAETLLSNQPTWANYSNSLDPNALEETIGTHVLIPVPGGLVELFVTEQVPEDQQVVDFITAHCNMDMSFDLDVNSISHMQPDINPLLGDENDGNAIASETSSLPPHDQCNSPVNLMQQYSYSNPHSNTMKSDGIFEDSQGSFLLNKSQKFGEPIDKKEQQGDDKDLIKHLVGRISKLDRASILGDAIEYVKDLQKQMKELQDELEEHSEMDEQEALDNVAGVEMGPKADQMKTQNGFHLGKSGNGHIWKQKQEFNAPYDKQTQQMEPQVEVAVIEGNELYVKLFCEHRPGGFAKLMEAFYALGLEVMHATVTSHKGLVSNVFKVEKKEAEMVKADEVRESLMELMRSPCRVGNHEMIIVNVAREYRQQEQEQLQLHNRHVAAYNNPHHLHHIHT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0037 489 SUPERFAMILY ACT-like 373 450 IPR045865 -
Lele47g0037 489 Coils Coil 278 312 - -
Lele47g0037 489 MobiDBLite consensus disorder prediction 181 207 - -
Lele47g0037 489 CDD ACT_UUR-ACR-like 376 440 - -
Lele47g0037 489 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 143 439 - -
Lele47g0037 489 ProSiteProfiles ACT domain profile. 375 454 IPR002912 -
Lele47g0037 489 MobiDBLite consensus disorder prediction 189 207 - -
Lele47g0037 489 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 263 304 IPR036638 GO:0046983
Lele47g0037 489 Gene3D - 248 304 IPR036638 GO:0046983
Lele47g0037 489 Coils Coil 419 439 - -
Lele47g0037 489 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 155 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0037 Lele-ChrLele47 287166 289362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0037 6 445 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 38.921 1.01e-98 306