Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0031 ATGATTCAATTTGGCTACTCAGAAAGGCTTTTTCGGGATATACTAGGCCCGTTGGTTCATGTGGGTCTTTTAGCTCCAGCAGAGCAATGTAGTGCTGCTGCAACACTGGGACTGCTAAATTTTATTACCCTTGCTCACCAGAAAGATTTTGATATGGCATGGCCTCGTGGAGCTGTAAAAGAAAAACATTTTCAGCCGTGGATGGATTCCCTAAGAGCTAAGGGCTGTAAATTTGTGGAAGATAGGAGTGTGACAGATTTAATCTTCAATGAGGAAACAGGTTGTGTTTCAGAGGTGAAGATTCCTGCTGCTATCAATGCTTGCTCTGGGTTTGACAACTCATTTGCGTGGACATTCTTTGACTTGAATGTCATTCAAGATGAGCATCAAAATGATTCTATGACAGTTTTGCAAACTGACTTTAACGGGATGCGTGCCTCCACATCTTTCCCAAACTTGTTCATGGCAGGTGATTGGATTGTGAACCGACACGGCTCATGGGCACAGGAAAAATCTTTTGTGACGGGTCTAAAAGCTGCCAATCGAGTGGTGGATTATCTCGAAGAGGGAAGCTTTGCTAGGATTCTACCCGTAGAAGAAGCTGAACCAGATATTCAGACTCTTCGGAGAAGAGATGTTGTGGATGCATATCTTGTGTCTTTTACTGGACAGCCACCGAGTCAAACTTCAAACTCAACCAGAGATTCCCATTCTCAGAAGCCTGATATTGAGATCAACACATCATTACACAAGGATAAATTATGGTTAACATTGTTTCCATTCCTACTCTCTGTCAATCTCTCTCTTGTGCTTCAGATCAGAGGGAAAAGAGAAGAGATACGCTTCGCCCACACCGGATCCAATTTTTCTCTCTCGAGTTCAAACATGGGTGTGGCTCAGAACAGTCTTGATTTGGAGGAGGGAACTTTGGAGATAGGAATGGAATACAGAACTGTATCTGGTGTTGCTGGACCATTGGTCATTCTCGACAAAGTTAAGGGACCCAAATATCAAGAGATCGTAAACATTCGTTTAGGAGATGGAACTACTCGACGAGGGCAAGTTCTAGAAGTTGATGGCGAAAAGGCTGTTGTTCAGGTTTTTGAAGGCACATCTGGGATTGACAATAAATTTACAACTGTGCAGTTTACTGGAGAGGTGTTGAAAACTCCTGTCTCACTGGACATGCTTGGACGCATATTTAATGGTTCTGGAAAACCTATTGATAATGGTCCACCCATATTGCCTGAGGCCTACTTGGATATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAAACAGGAATATCTACAATTGATCTCATGAATTCCATTGCTAGAGGTCAAAAGATCCCTCTTTTCTCAGCTGCTGGTCTTCCTCATAATGAAATTGCTGCTCAGATATGTCGCCAGGCTGGCTTAGTCAAGCGATTGGAGAAGACTGATAATCTTCTTGAGGGTGGGGAAGAAGACAATTTTGCCATTGTGTTTGCTGCTATGGGTGTTAATATGGAGACTGCACAATTTTTTAAACGTGACTTTGAGGAGAATGGCTCAATGGAGAGGGTGACTCTGTTTCTTAATCTGGCAAATGATCCAACAATTGAGCGCATTATCACTCCTCGTATTGCTCTAACAACTGCTGAATATTTGGCTTATGAATGTGGGAAGCATGTTCTTGTGATACTTACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCTCGGGAAGAAGTGCCTGGAAGGCGTGGTTATCCAGGTTACATGTATACTGATCTTGCAACAATCTATGAACGTGCTGGAAGAATTGAGGGGCGAAAAGGCTCTATTACACAAATTCCAATTCTTACCATGCCAAATGATGATATCACACATCCAACTCCTGATCTTACGGGATACATTACTGAGGGGCAGATATACATAGATAGGCAGCTGTATAACAGACAGATATACCCACCAATCAATGTCCTTCCATCACTATCTCGTTTGATGAAGAGTGCCATTGGTGAGGGAATGACTCGAAGGGATCATTCTGATGTTTCGAACCAGCTCTATGCAAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCCGTGGTTGGAGAAGAAGCACTTTCATCTGAGGATCTGCTGTATCTAGAATTCTTGGACAAGTTCGAGAGGAAATTTGTTACCCAAGGAGCTTATGACACCCGCAACATCTTCCAGTCCCTAGATCTTGCATGGACTTTACTTCGGATTTTCCCCCGTGAGCTGCTTCATCGTATACCAGCAAAGACTCTTGACCAATATTATAGCCGAGACGCTGGTAATTAA 2352 0.4307 MIQFGYSERLFRDILGPLVHVGLLAPAEQCSAAATLGLLNFITLAHQKDFDMAWPRGAVKEKHFQPWMDSLRAKGCKFVEDRSVTDLIFNEETGCVSEVKIPAAINACSGFDNSFAWTFFDLNVIQDEHQNDSMTVLQTDFNGMRASTSFPNLFMAGDWIVNRHGSWAQEKSFVTGLKAANRVVDYLEEGSFARILPVEEAEPDIQTLRRRDVVDAYLVSFTGQPPSQTSNSTRDSHSQKPDIEINTSLHKDKLWLTLFPFLLSVNLSLVLQIRGKREEIRFAHTGSNFSLSSSNMGVAQNSLDLEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDLMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAGN 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0031 783 FunFam V-type proton ATPase subunit B, brain 324 783 - -
Lele47g0031 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 678 IPR027417 -
Lele47g0031 783 Pfam ATP synthase alpha/beta family, beta-barrel domain 319 385 IPR004100 GO:0046034|GO:1902600
Lele47g0031 783 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 300 780 IPR022879 -
Lele47g0031 783 Gene3D - 324 782 - -
Lele47g0031 783 CDD V_A-ATPase_B 387 674 - -
Lele47g0031 783 CDD ATP-synt_V_A-type_beta_N 315 386 - -
Lele47g0031 783 Hamap V-type ATP synthase beta chain [atpB]. 313 781 IPR022879 -
Lele47g0031 783 ProSitePatterns ATP synthase alpha and beta subunits signature. 663 672 IPR020003 GO:0005524
Lele47g0031 783 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 442 672 IPR000194 GO:0005524
Lele47g0031 783 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 315 781 IPR005723 GO:0033180|GO:0046961|GO:1902600
Lele47g0031 783 CDD ATP-synt_V_A-type_beta_C 682 776 - -
Lele47g0031 783 SUPERFAMILY FAD/NAD(P)-binding domain 67 194 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0031 Lele-ChrLele47 245157 258527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0031 294 783 Primary Pumps ATPases(2) AT4G38510 96.122 0.0 969