Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0024 ATGGTGGTGAATCAGGCTGACCAGGGCAGTGCTGGTAGAGTGCCCACTACGTCTTCTACGCCTCAGAGTCGACAGCAGAGTCAGAAGCTCAAAGTTTACCGCGAGGTTCTTCGTCGCCTCAAGAATTCCAACAACGACGAGGCTATGCAGCCTGACTTCGACCATCAACTTTGGGGTCACTTCAACCGCCTCCCAACACGATATGCGTTGGATGTTAATGTGGAAAGGGCGGCAGATGTTCTCACGCATAAGAGATTACTGCATTTGGCTCATGACCCTGCTAATAGGCCGGCCATTGAAGTTCGCCTAGTCCAGATTTATCCCACATCTGATGGAAATTCAGCTGACTCCGTCCATTCAGATGTAACTAGGGAAGAAGCTTGTCAAACCTCTCCAAATTACTCAAGGAGACTGAGTATTCATCCTCCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCCCTGGCACTTGAAGCTGATAAATCTGAAGATGAGGAACACTCTGTGCATGGGAGTGATAAATATTCTCAGCCCATGCATGAAATCACCTTTTCTACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGCTTGCTGAAATTGGTTTAAACATCAGAGAGGCACACGTCTTTTCCACTATTGATGGCTTCTCATTAGATGTGTTTGTTGTTGACGGATGGCCCTATGAGGAAACACAGCAGCTTAAGGCAGCTTTGGAGAAAGAAATATTGTTGATTGAGAGGCATGCATTTCCTACTCAGCAGTCAGAATTTTATGTTGGCAAGACTGATCAAGTGGAGATGAAATGTGAAGAAGGTCATTTGGTGATACCAAATGATGGGTCAGACGTTTGGGAAATAGAGCCTAAACATTTGAAATATGGAAATAAAATTGCATCTGGGTCATTTGGTGAACTGTTTAGAGGTACATATTGTAGTCAGGACGTGGCTATTAAAGTTCTCAAGTCTGAGAATATTAGTTCAGATTGGAAGAAAGAGTTTGCCCAGGAAGTCTATATCATGAGAAAGGTTAGGCACAAGAATGTTGTGCAATTTATTGGAGCATGTACCAAGCCACCACACTTTTGCATAATAACAGAATTTATGAGTGGTGGGAGTGTGTACGACTATTTGCATAAGCAGAAGGGTGTTTTTAAATTTCCGTCCCTACTCAGAGTAGCGATTGATGTTTCCAAGGGGATGAACTACTTGCACCAAAATAATATTATCCATAGAGATTTGAAGGCTGCTAATCTTTTGATGGATGAAAATCATGTTGTCAAGGTTGCTGATTTTGGTGTTGCTAGAGTGAAAGATCAATCCGGAGTTATGACAGCAGAAACTGGTACATACCGATGGATGGCACCTGAGGTTATAGAACACAAACCATATGATCAAAAGGCTGATGTGTTTAGTTTTGGAGTTGTTTTGTGGGAATTGCTCACTGGAAAGCTTCCATATGAATTTCTGACCCCACTACAGGCAGCAATAGGAGTGGTTCAAAAGGGCCTACGACCCACGATCCCCAAGAACACACATCCAAAATTTGTTGAGCTTCTTGAGAGGTGTTGGCAGCAAGATCCGACATTAAGACCTGATTTCTGTGAAACTATTGAGATCCTGCAGCAATTAGCTAACGAGGTTGGGAATGATGGGGAGGAGAGGCGAAGGGAGAAATCTGGAGGATTCTTTTCTGCCCTCAGACGAGTTGACATTGTCTTCTGTCTTTTTCTCTCTATTGCCTTCTGCCTTCCAAAGTACATTACTAATTACCAGATGTTGGAACCAGCGTATGATCCCTTTGAGCTTCTGTCTTTGAAAGTGGCTACATTTGACATTTCTTTCTCTTTGGTTGATCGCCAGCTGAGGCATGCAAGGGAATTTGCCCTAGTGATTGGTCAATGCAAGATATCTACGGCCATGCAAGAAAATGTAATAAGTGCTTCGCTTACTCCAAATGCAAACTCAGTTTGCCGCGTAATCTTCAGCCTCTGGAGAAATCAAATCTCACCCTCAATAACAAAACAATCCTATGCATGCTTTAGCTCGTCATCATCACAAGCAATCCATATCATCACTATTCCCATAATTAGTTTCCTGTTTGATGCCAGGTTGTTCATGTTTCTGTCCGCCAACCTGCACATTGACACCGATTCACGTCGGATTCCGAGTACACCTCGCTACTTATTCTTTTTTATGGATTTCGCGCTCGGCAAATCTTTCAATTCCTATGGTTCGCTCAAGCGTTCCCAGAAGTTTTCCACAGGGGACAGCGCTGACGCTGGGCGCGAAGAAATTCCCACCCTCCTTGAACAAGATCCATCCTCTCCCGAACGTGAACGTAATCTTCCTCAACCCCACGCTGCTCCTTCTTCCTCCATGACCTTCGCCGACAGACCCACCTACAGCGGAGAGGTGATCGTCAAGATCGATGACAGTGACTCCAAATCCTCCAAAGCCGCCTCCAGCTCACAGGGCGGAGACTTCTGGACAGCAGGTGACATCACCCCCACCTTGCATGGACAGAGTTTCGATTTCCAGCAACCTGGCCCCAAACCGGAGGACCCTCCCTCCAGGCTCATTGGTAAATTCTTGCACAGACAAAAGCTCTCCGGCGACATGGCCCTCGATATGGATTTAGAAATGGACGAGCTCCAACAACATGATCCTTACAAGACGTATTTGCCTCCGCTCGACGAGAATGCGTCGGTGTGTTTCTCCAGGGAGTACAAAGTCTCCTTCGAAGAACCGTCTCCTAATTCCGCCGACGAACCAGGCGATTCCGTTCGACGAAGGTACAAGGATACGCCGATCATGGATGAATTCCCGAAACCACCACAACCCGACCGTCGTGGCTCAGCTCAGAATATTCATCCGCCAAACGGAGACGGCGAGGTTGTGAGGTGCAGCTCAAACGCGTCTTTCGAGAGGAACCTTTCGTTGCAGAGGAGGTCCGGTTTGCTCAGGGCGAAAACCATCAAATCAAGACTGATCGACCCGCCAGATGAGCCCGATCGGAGGTCGGGCCGGATTCAGAGATCGGGGCAGATGCTGTCGGGTTTGCAGCCAGGGAATAATAAGAAAGGGGATGAGGAGGAGGAAGACCCATTTTTGGAAGAGGATCTTCCGGATGATATAAAGAAGACCAAATTCAGCATTTGGGTTCTACTAGAATGGTTGAGTTTGATTTTAATTGTGGCGGCATTGATAACCACTCTCTGTATCCCATTCTTGAGGGGAAAGAATCTGTGGAAGCTCAAGTTATGGAAATGGGAGGTAATGGTTTTGGTTCTGATTTGTGGCAGGTTAGTTTCGGACTGGGTGATTCGAATTGCAGTGTTCTTCATCGAAAGGAATTTCCTTCTGCGTAAGAGGGTGCTGTACTTTGTTTACGGGTTGAAGAAGGCAGTTCAAAATTGCCTCTGGTTGGGCCTCGTTTTACTTGCATGGCACTCTCTATTCGATCAAAAAGTGGAAAGGGAGACAAAAAACGACTTCCTAGAATATGTGACCAAGGTGTTGATCTGCTTCTTGGTGGGGACTCTGGTGTGGCTGGTGAAGACTCTGATGGTGAAGGTTCTGGCTTCTTCGTTCCATGTGAGCACCTACTTCGACAGGATACAGGAATCGTTGTTCAATCAGTACGTGATCGAAACACTGTCAGGGCCGCCATTGGTGGAGATCCAGAGGCAGGAGGAGGAGGAGGAGAAGCTGGCGGAGGAGGTGATGAAGCTTCAGAATGCAGGAATCACCATACCTCCAGATCTGAGGGCGTCGGCGTTCTCTTCTCTGCATAATAAGAGCCCGAAGGTGAACAGGAGTGGGATGCTTCTCAAGAGTCCTCAGCTGAAAAGTGGCAAGTTGTCTCGACCACTTGCCAACAAGAAATCAGATGAAGGGATAACTATTGATTACTTACATAAGTTGAACCCCAGGAATGTGTCGGCATGGAATATGAAAAGGCTGATGAATATTGTGCGACACGGTACTCTTTCCACGCTTGACGAGCAGATCCAAGGTTCAACCTATGAGGATGAACATATCACGCAAATCCGAAGTGAGAACGAGGCCAAAGCAGCTGCCAAAAAGATATTTCAGAATGTCACCAGGCGCGGATCCAGGTTCATATACCTAGAGGACTTGTTGCGCTTTTTGAGAGAAGATGAAGCTGTCAAAACCTTTAGTCTATTCGAAGGAGCGCCTGATAGCGGCAAAATCAGTAAATCAGCCTTGAAGAACTGGGTGGTGAACGCGTTCAGAGAGAGGAGAGCGCTTGCTTTGACGTTGAATGACACGAAAACGGCAGTAAACAAACTCCACCGAATGCTCAACTTTTTAGTGGCCATTGTCATTCTCATTATTTGGCTCTTAATACTGGAAATTGCCACCAGCAAATTTCTTGTCGTCGTCAGCTCCCAGCTCGTTCTGGCTGCATTCATATTTGGAAATACCTGCAAGACCGTATTCGAAGCCATCATTTTCTTATTCGTCATGCACCCTTTTGATGTGGGAGATAGATGTGAAATTGATGGCATTCAGATGATTGTGGAGGAAATGAACATCCTGACAACCGTATTTCTGAGATACGACAATTTGAAGGTAATGATCCCTAACAGTGTTCTTGCTACAAAGGCCATATATAATTTCTACCGGAGTCCGGACATGGGGGATGCTGCGGAGTTCTTAGTACATTTCGGTACCCCACCCGAAAAGATCACACTCATCATAAACAAAATAAGGAGTTACATCCAAAGCAAGAAGGAGTTCTGGGATGCCTCGCCTATGATAGTGTACAAGGACGTGGAGCAACTGAACATGATAAAACTAGCAGTATGGCCAAGTCACAGAATGAACCACCAAGACATGGGCGAAAGGTTCGTCAGAAGATCGCTTCTGATTGAAGAGATGATCAAGATCTTCCGGGAGATCGACATTCAATTCCGGTTGCTTCCCCTCGACGTCAGCGTTCGAAGCACGCCGACCACCTCCGAACGCCTTCCTCCTAGTTGGGTCACTGCGACAACATCACCTAATTAA 5043 0.4624 MVVNQADQGSAGRVPTTSSTPQSRQQSQKLKVYREVLRRLKNSNNDEAMQPDFDHQLWGHFNRLPTRYALDVNVERAADVLTHKRLLHLAHDPANRPAIEVRLVQIYPTSDGNSADSVHSDVTREEACQTSPNYSRRLSIHPPPAFGSSPNLEALALEADKSEDEEHSVHGSDKYSQPMHEITFSTDDKPKLLSQLTSLLAEIGLNIREAHVFSTIDGFSLDVFVVDGWPYEETQQLKAALEKEILLIERHAFPTQQSEFYVGKTDQVEMKCEEGHLVIPNDGSDVWEIEPKHLKYGNKIASGSFGELFRGTYCSQDVAIKVLKSENISSDWKKEFAQEVYIMRKVRHKNVVQFIGACTKPPHFCIITEFMSGGSVYDYLHKQKGVFKFPSLLRVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEFLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWQQDPTLRPDFCETIEILQQLANEVGNDGEERRREKSGGFFSALRRVDIVFCLFLSIAFCLPKYITNYQMLEPAYDPFELLSLKVATFDISFSLVDRQLRHAREFALVIGQCKISTAMQENVISASLTPNANSVCRVIFSLWRNQISPSITKQSYACFSSSSSQAIHIITIPIISFLFDARLFMFLSANLHIDTDSRRIPSTPRYLFFFMDFALGKSFNSYGSLKRSQKFSTGDSADAGREEIPTLLEQDPSSPERERNLPQPHAAPSSSMTFADRPTYSGEVIVKIDDSDSKSSKAASSSQGGDFWTAGDITPTLHGQSFDFQQPGPKPEDPPSRLIGKFLHRQKLSGDMALDMDLEMDELQQHDPYKTYLPPLDENASVCFSREYKVSFEEPSPNSADEPGDSVRRRYKDTPIMDEFPKPPQPDRRGSAQNIHPPNGDGEVVRCSSNASFERNLSLQRRSGLLRAKTIKSRLIDPPDEPDRRSGRIQRSGQMLSGLQPGNNKKGDEEEEDPFLEEDLPDDIKKTKFSIWVLLEWLSLILIVAALITTLCIPFLRGKNLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVFFIERNFLLRKRVLYFVYGLKKAVQNCLWLGLVLLAWHSLFDQKVERETKNDFLEYVTKVLICFLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQYVIETLSGPPLVEIQRQEEEEEKLAEEVMKLQNAGITIPPDLRASAFSSLHNKSPKVNRSGMLLKSPQLKSGKLSRPLANKKSDEGITIDYLHKLNPRNVSAWNMKRLMNIVRHGTLSTLDEQIQGSTYEDEHITQIRSENEAKAAAKKIFQNVTRRGSRFIYLEDLLRFLREDEAVKTFSLFEGAPDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIVILIIWLLILEIATSKFLVVVSSQLVLAAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDGIQMIVEEMNILTTVFLRYDNLKVMIPNSVLATKAIYNFYRSPDMGDAAEFLVHFGTPPEKITLIINKIRSYIQSKKEFWDASPMIVYKDVEQLNMIKLAVWPSHRMNHQDMGERFVRRSLLIEEMIKIFREIDIQFRLLPLDVSVRSTPTTSERLPPSWVTATTSPN 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0024 1680 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 784 1672 IPR016688 -
Lele47g0024 1680 MobiDBLite consensus disorder prediction 819 847 - -
Lele47g0024 1680 CDD ACT_TyrKc 179 246 - -
Lele47g0024 1680 ProSiteProfiles Protein kinase domain profile. 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0024 1680 SUPERFAMILY ACT-like 179 243 IPR045865 -
Lele47g0024 1680 FunFam Predicted mechanosensitive ion channel 1502 1551 - -
Lele47g0024 1680 Gene3D - 1502 1551 IPR023408 -
Lele47g0024 1680 Gene3D Phosphorylase Kinase; domain 1 284 372 - -
Lele47g0024 1680 FunFam Serine/threonine-protein kinase isoform 1 284 372 - -
Lele47g0024 1680 MobiDBLite consensus disorder prediction 1660 1680 - -
Lele47g0024 1680 Pfam Mechanosensitive ion channel 1444 1648 IPR006685 GO:0016020|GO:0055085
Lele47g0024 1680 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Lele47g0024 1680 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Lele47g0024 1680 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Lele47g0024 1680 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Lele47g0024 1680 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Lele47g0024 1680 MobiDBLite consensus disorder prediction 815 861 - -
Lele47g0024 1680 Gene3D Transferase(Phosphotransferase) domain 1 373 563 - -
Lele47g0024 1680 MobiDBLite consensus disorder prediction 937 970 - -
Lele47g0024 1680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lele47g0024 1680 SUPERFAMILY Sm-like ribonucleoproteins 1492 1551 IPR010920 -
Lele47g0024 1680 Coils Coil 231 251 - -
Lele47g0024 1680 SUPERFAMILY Protein kinase-like (PK-like) 283 541 IPR011009 -
Lele47g0024 1680 MobiDBLite consensus disorder prediction 1 29 - -
Lele47g0024 1680 ProSiteProfiles ACT domain profile. 181 256 IPR002912 -
Lele47g0024 1680 Coils Coil 1227 1250 - -
Lele47g0024 1680 SMART serkin_6 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g0024 1680 MobiDBLite consensus disorder prediction 994 1041 - -
Lele47g0024 1680 MobiDBLite consensus disorder prediction 997 1012 - -
Lele47g0024 1680 MobiDBLite consensus disorder prediction 771 800 - -
Lele47g0024 1680 CDD STKc_MAP3K-like 300 543 - -
Lele47g0024 1680 Pfam Protein tyrosine and serine/threonine kinase 294 542 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0024 Lele-ChrLele47 184807 197291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0024 807 1680 Mechanosensitive Ion Channel Family AT1G78610 55.641 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele47g0024 PK_Tyr_Ser-Thr 7e-73 CL0016