Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0017 ATGGGCGATCTCCAACTGCCGGGCTTCCGATTTCACCCCACCGATGAAGAACTCCTTGATTTCTACCTTAAGAATATGATCACCGGCACCGGAGACAAACTCTGCCTCGACGTCATCCACTTCCTCAACATCTACCTCCACGATCCCTGGGATTTACCCTCCATGGCCCACGTTGGCGAAAGAGAGTGGTACTTCTTCGTTCCCCGAGATAAAAAGCACGCCGGCTCCGGCAGGCCTAACCGTACCACCCAAAAGGGCTTCTGGAAAGCCACCGGCTCCGACCGCAAGATCCTCAGCCTCTCCCACCCCAAGCGCCTCATCGGCCTCCGTAAGACCCTCGTCTTCTACCTCGGAAGAGCTCCCCGTGGCTCCAAGACAGATTGGATCATGAACGAGTACCGCCTCCCCGACTCCTTCAACTTCCCCGACAAGGACGCCATAGTGTTGTGCAAGATATACAGAAAGGCTACATCGTTGAAAGTGCTGGAGGAGAGGGCAGCGCAGTGCGAGTCCTCCTCCTCCTCCGTGCCTGCCTTCCAGCCCAAGACGGAACAGATGGAAGAGACGGTGCCTGAGCTCAACCTGCCGGAGCTCCAGTTACCCGTGAACACGGGCTGGACCCAAGACCCCTCTTGGCCTCAATTAAACAGTCCTTGGCTCCAATGTTTCACTCCCCTCACTATTTCCAAACTCTTGAATTGTTAA 705 0.5574 MGDLQLPGFRFHPTDEELLDFYLKNMITGTGDKLCLDVIHFLNIYLHDPWDLPSMAHVGEREWYFFVPRDKKHAGSGRPNRTTQKGFWKATGSDRKILSLSHPKRLIGLRKTLVFYLGRAPRGSKTDWIMNEYRLPDSFNFPDKDAIVLCKIYRKATSLKVLEERAAQCESSSSSVPAFQPKTEQMEETVPELNLPELQLPVNTGWTQDPSWPQLNSPWLQCFTPLTISKLLNC 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0017 234 Pfam No apical meristem (NAM) protein 7 135 IPR003441 GO:0003677|GO:0006355
Lele47g0017 234 SUPERFAMILY NAC domain 6 155 IPR036093 GO:0003677|GO:0006355
Lele47g0017 234 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Lele47g0017 234 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Lele47g0017 234 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0017 Lele-ChrLele47 145615 146478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0017 3 227 NAC Transcription Factor Family AT2G17040 52.878 6.01e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele47g0017 NAM 2.1e-33 No_clan