Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele47g0015 | ATGTGGGTGATGAATCGCGTTTCTGTCTTTTATAAGTATTCACGCTTTCATTTTTCTTTCTTGAAATCTTGGATGGAGATACGTGATGTGTATAACCTTGATCAGCCTCTGCTTCGTTGGTTGGTTGGAGATGAGTTGAAGTACACAACCGCCAAGTCACTTTTTGAAGATAGTTCCAGTTTCGCATCAATCTTCCAACTGTCAAAACCAGCCCGTACCTGGGAATATATTTCTGCTGTAACCCAAGTGGTAAGTTTGTTTGATTTGATCAAGTTTGGTTCAATGTTTTGTTTTCTCTCTTCATGCAGTTGGTTTGAAATCTCTGGGAGTGGTGAAAGCCCAACAGAGACGAGTACCGCTAGGAAGCTTGTTTCTTCTAGTTCTGAATCGGACCTTGATCGACCCAATATTGAAGATTACCTCCCATCTGGGTCCACCATTCAACAAGAACCTCATGGGAAGCTGTGCCTGCATGACTTACTCAACATTTCTCCTACTTTATCCGAGGCAGCTGGTGCCATTGTAGATATATTTGATATTGTTCCCTTCAAGGGTCCTAGTGCTGACAATAGGATGGATGATAATATTTCTTTCATCCTTCATTCCTGTGCATTTCCTATTGAAGGGACACGACAAGTTGAGGGAAAAGATCGAGTTCTCCCTACATTTCTTGAACAAGTTTTTGTGGCCAACTATACTTCCGTGATTGATTTCATTATTTTAGAACAGAAGACTGCATTTGCTGTAATTATGCAAAAGCATCCTCGATGGGTTGGATTATTGCAGAGCACCATTTTGGAGAGTGTAGGATGTATCTGGTTCAATCGTTCTGAGGCAAAGGATCGAGAAATTGGTGCATTTGAACTTGGCTGCACAGTTTGCCTTGTTGCAATAAAATATAATAAAATATTTGTGGATGCTTTTTGGAATAGTCGAAAGCAATCATTCACCATGCATCTGTTACAGCTAATGACATCCTGGGCTGTTGTTTGTGATGTTTGGTACTTGGAGCCCCAGAAACTGAAGCCAGGAGAAACAGCCATTGAGTTTGCTGAGAGCTTCTTGATTAGCACCCCATGTGACATCTTCACCATCTGCACTTTTCGTCTCTGGAGTTCATCTCAATATGTATCTACTCTGACGCCTCTCATTTGCGGCACATCTTCAAGTTTTACCATCTCGAATTTTCAAAAGTCGCACTTTCAACTGGAGCTTGAGCTCATTACCCGTGGTCCCTTCTACATTTATGAAGTTTCAGCTCCTTTCCAAGTCCTTGGCCGAAAAAGCTCCTTTCAAAGTCTTTCTCTCAGTTTCTCACTTAGATCCCGTTTGGATTGGGGCTGCGTCTTCCCTGGGGCAACCCATTCGCAATTAACTATATCAATCTTCGTAGATTATCTCATCCGGCCTGGAAAAGTTGAGGCAGAAATGGGCCTTGCTCGGTTATTACTGGTAATCGTATTCGGTGTCGCCGCCACATCATGGGTGGTGGTGGAAGCTCAGCCAGAGGCGAAGTTCAAATGCAGCTCGGTAGGTAAAACGTGTCGTTCCTTGGTGGATTATTCGTCCCCAAACGAAACCACCTTAGGCCACATTCAAAATCTCTTCAACTTGAAGCACGTTCTGGACATAGTGGGTGCCAACGCCCTCCCCTCCACCACCCGAGGCAACCACACCGTTGAAAAGGGCGCCATTATTAAAATCCCCTTTCAGTGCAAGTGCTCCAACGGCACCGGCTTGTCCAACAAGACGCCTCTCTACACCATCCAGAAAGATGACACTCTTTCCCACATAGCCATGGAAGTGTTCTCGCGTTTGGTCACTTTCCAACAAATCCAAACGCTCAACAACATATCCGACGCCACAAAAATTCAGCCTGGCCAGAAGGTGTGGATCCCTCTCCCTTGCAGCTGCGATCAGGTGGACGGCACCGATGCCGTCCACTATGGACATCTCGTGGCTATGGGGAGCTCCTTTCCGCAGATTGCTCAACAATACGGCACCACCCAGGATACCCTTCTCAACCTCAACGGCATTTCTGACCCTAAGTCGCTTCAAGCCGGTCAAATCATCGATGTCCCCCTCAAAGCTTGTTCCTCATCGACGGTAAAAAATGGCTCATTGGACTACCCTCTGCTCGTTGCAAATGGTACAGACACCTACACCGCCAATGGCTGCGTCAAGTGCAGCTGTGACTCCGCCGCCAATAACGCCACATTACAATGCGAGCCATCGCAAGTTAAACCATATAGATGGGAAACATGCCCCTCTATGCTATGCGGAAATTCAACCATAGGCACCGTCACTTCCACAGATTCCTGTACTCGCACCATCTGTGCTTACGCTGGTTATAACACCCAAAACCAAACTATTTCCGCCGCACTTGTCAACGAGTCCACTTGTCCTGCACCAACAGCATCAGGAGCATCCAGGATCAGCTTGCAAGGCTGGGGTTGGAGTCATCTTGTGATTGCCCTTCACGTTATCTTCTTTTGTGTCTATCTTTTGTAG | 2511 | 0.4604 | MWVMNRVSVFYKYSRFHFSFLKSWMEIRDVYNLDQPLLRWLVGDELKYTTAKSLFEDSSSFASIFQLSKPARTWEYISAVTQVVSLFDLIKFGSMFCFLSSCSWFEISGSGESPTETSTARKLVSSSSESDLDRPNIEDYLPSGSTIQQEPHGKLCLHDLLNISPTLSEAAGAIVDIFDIVPFKGPSADNRMDDNISFILHSCAFPIEGTRQVEGKDRVLPTFLEQVFVANYTSVIDFIILEQKTAFAVIMQKHPRWVGLLQSTILESVGCIWFNRSEAKDREIGAFELGCTVCLVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVCDVWYLEPQKLKPGETAIEFAESFLISTPCDIFTICTFRLWSSSQYVSTLTPLICGTSSSFTISNFQKSHFQLELELITRGPFYIYEVSAPFQVLGRKSSFQSLSLSFSLRSRLDWGCVFPGATHSQLTISIFVDYLIRPGKVEAEMGLARLLLVIVFGVAATSWVVVEAQPEAKFKCSSVGKTCRSLVDYSSPNETTLGHIQNLFNLKHVLDIVGANALPSTTRGNHTVEKGAIIKIPFQCKCSNGTGLSNKTPLYTIQKDDTLSHIAMEVFSRLVTFQQIQTLNNISDATKIQPGQKVWIPLPCSCDQVDGTDAVHYGHLVAMGSSFPQIAQQYGTTQDTLLNLNGISDPKSLQAGQIIDVPLKACSSSTVKNGSLDYPLLVANGTDTYTANGCVKCSCDSAANNATLQCEPSQVKPYRWETCPSMLCGNSTIGTVTSTDSCTRTICAYAGYNTQNQTISAALVNESTCPAPTASGASRISLQGWGWSHLVIALHVIFFCVYLL | 836 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele47g0015 | 836 | CDD | LPLAT_LPCAT1-like | 227 | 352 | IPR045252 | GO:0008374 | |
| Lele47g0015 | 836 | Pfam | LysM domain | 653 | 694 | IPR018392 | - | |
| Lele47g0015 | 836 | Pfam | LysM domain | 587 | 633 | IPR018392 | - | |
| Lele47g0015 | 836 | PANTHER | LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 | 482 | 804 | - | - | |
| Lele47g0015 | 836 | SUPERFAMILY | LysM domain | 586 | 634 | IPR036779 | - | |
| Lele47g0015 | 836 | CDD | LysM | 661 | 693 | IPR018392 | - | |
| Lele47g0015 | 836 | Gene3D | LysM domain | 581 | 642 | IPR036779 | - | |
| Lele47g0015 | 836 | MobiDBLite | consensus disorder prediction | 110 | 135 | - | - | |
| Lele47g0015 | 836 | SUPERFAMILY | LysM domain | 650 | 694 | IPR036779 | - | |
| Lele47g0015 | 836 | CDD | LysM | 587 | 632 | IPR018392 | - |
Showing 1 to 10 of 16 entries
Duplication type information
Functional genes information