Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0012 ATGTCGGCTCCGAACCCCAGTTACCAGTTGGACTATGCAATAACAGATATTGGAGAATACGAGGATGTTGGTGAAAATGGAGTTCCAGTGTTTGTGAAGCACACAGAAGCAATGCTGGACGAAATTGACAGATTAGAGGAAGTGGAAATGGAAGACGTGGAGGAGCATGTTATGGACATCGACGTTTGTGATACGAAAGATCCTCTAGCAGTTGTTGAATACATAGATGAGATCTACGAATTTTATAAGAAAACTGAGAATTCCAGCTGCGTCTCTCCAGACTACATGGCCGGCCAGTTTGACATCAATGAGAAGATGAGGGGTATCCTCATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAGACATTGTACCTTACCGTCAATCTTATAGACAGGTTCTTGGAGCGTCAAGCGGAGAAGTTAATGGTGAACACGTTACAATTCAACCTGTGTGTGCCTACTCCATATGTGTTCATGAGGAGATTTCTTAAAGCAGCTCATTCTGACAAAAAGCTGGAGCTCTTGTCCTCCTTCATAATCGAGCTTTGCTTGGTGGAATACAAAATGCTCAAGTTTTCACCGTCTTTGCTAGCTGCGGCAGCCATTTACACAGCTCAGTGTAGTCTGTACCAGTTTAAGCAATGGACGAAGACCAGTGAATGGTATACTAATTACTCGGAAGAGCAGCTTCTAGAGTGCTCGAGAATGATGGTTACTTTCCATCAGAAGGCTGGGACTGGAAAACTAACAGGAGTCTGTAGAAAGTACAACATGTGGAACTCCACTTCTGTTTCTCATACAGCCATTTTGCTAGGTGATCACAAAGTTCTTCTCAGAACGTATAGCGAAGTGACTCCTAATCTTAATGGCAATCTAGTGGCAAACACAGCTTGCCGGAGGCCCTGGCATCATGCGCGGAGGAAACGTGGGGGCGGATTGGCGGAACATGCGTTGTTCGAGCAAGGGGCTTCAGCAGGGAATGTGGGGAATGAGAACTTAGTGGAGCACAGGAGAGCGAATCCAGTGGCTTTGCTGCTGTCATCGGCAATGATGCTGAGGCACCTTCAGTTCCCTTCTTTTGCCGTGAAGCGGATCATCTCAGACGGCAAGTTCCGCACCAAAGATCTCGGTGGCGACAGCACTACTCAAGAGGTTGTCGAGGCCGTCATTGCCAACCTCAACTAA 1200 0.465 MSAPNPSYQLDYAITDIGEYEDVGENGVPVFVKHTEAMLDEIDRLEEVEMEDVEEHVMDIDVCDTKDPLAVVEYIDEIYEFYKKTENSSCVSPDYMAGQFDINEKMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLERQAEKLMVNTLQFNLCVPTPYVFMRRFLKAAHSDKKLELLSSFIIELCLVEYKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEEQLLECSRMMVTFHQKAGTGKLTGVCRKYNMWNSTSVSHTAILLGDHKVLLRTYSEVTPNLNGNLVANTACRRPWHHARRKRGGGLAEHALFEQGASAGNVGNENLVEHRRANPVALLLSSAMMLRHLQFPSFAVKRIISDGKFRTKDLGGDSTTQEVVEAVIANLN 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0012 399 SMART cyclin_7 162 244 IPR013763 -
Lele47g0012 399 Pfam Cyclin, N-terminal domain 77 143 IPR006671 -
Lele47g0012 399 ProSitePatterns Cyclins signature. 107 138 IPR006671 -
Lele47g0012 399 Gene3D - 144 279 - -
Lele47g0012 399 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 321 398 - -
Lele47g0012 399 FunFam G2/mitotic-specific cyclin-1 147 270 - -
Lele47g0012 399 Gene3D Isopropylmalate Dehydrogenase 286 399 - -
Lele47g0012 399 Gene3D - 92 142 - -
Lele47g0012 399 SUPERFAMILY Cyclin-like 66 155 IPR036915 -
Lele47g0012 399 SMART Cyclin_C_2 158 275 IPR004367 -
Lele47g0012 399 CDD CYCLIN 157 243 IPR013763 -
Lele47g0012 399 SUPERFAMILY Cyclin-like 157 271 IPR036915 -
Lele47g0012 399 PANTHER CYCLINS 59 140 IPR039361 -
Lele47g0012 399 Pfam Cyclin, C-terminal domain 158 269 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0012 Lele-ChrLele47 95755 101121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0012 14 262 Core Cell Cycle Gene Families AT1G20610 56.146 4.78e-109 325