LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele47g0010	ATGGAATATGGTGCCCTAATACACAATAGTTCTGCATTTGAGACCTTATCAGACAGTGCAGCCTCAGTTTCAGAAGGGGATTTCCTTGACGAGATCTTTGCACATGGTTGTTGGCTGGAAACCACTGGAGGATCATACAACCTCACGCAGCCTTGTGCTACGAATCCTCCTTCTCTCAATGACCCCGATTTGCAGTTGCACTATTGGACATCCTCAGACCCAAATTACCAAATCTATCAACAAGAATCAGAGGTAAGTTTTCCCTTCCAAACCGAAACTGAAGTGGGAAAAAGGTGGTGGATTGGACCAAAGGCAAATCCCGGCCCATCTTCCTCGGTCAAAGAAAGATTAGTGCTTGCCGTGGGGTACTTGAGAGAATACACCAAGAATACCAACGTGTTTCTTCAGATATGGGTGCCCACTAGGAGAGAGGGAGCATACGTTCTAACCAGTGCTCACGATCACGCTCCCCCACACTCATCCGTTGATGATCCGAACTGCAAGACTCAATATTACCGAAATGTTTCCAAAGGTTATCAGTTGGCCGCCGAGGATGAAACGGAGGAGTGTCGAGTAATCCTAGGAAAATTGCCTGATCAGTGGACCCCCACTGTTCGGTTTTTCAAAAGCCACGAGTATGTTTCATATGTAAATTATGCGCAGCAGCACTACGATTTAAGTGGATCATTGGCCCTTCCAGTGTTTGAGCGAGGCAGCGGGACATGCCTCGGCGCTGTTGAGATTCTAATGACCAATCACAACATCAACTATCACCCGCAAATTGACAATGTCTGCCATTCTCTCCAGGCTGTTGATTTTAACAAGAGTACGACTTGTCAGAACCTTATTGCTCCTGCTGTGAAGGTATTTGACGAGTTGTACCTAGCTGCACTAAATGAGATTGTAGGGGTGTTGACCTCTGTGTGCAAGACCCATAATTTGCCTTTAGCTCTCACTTGGGCGCCCTGCGGCCAACAAGGTAAGGGCGGATGTCCCAACGACAATTTCGTGGCTTGTTTGTCCACTGTGGATTCTGCTTGCTTCGTGGCGGATTTAGACTTGCTTGGCTTCCAAGAAGCCTGCTCTGAGTACCACCTTCTTCGAGGGCAAGGCATTGTTGGCACCGCCTTCACCACCACCAAGCCATGCTTCGCAACCGACATAACTGCCTTCAGCAAAACTGAGTATCCTCTGTCTCACCATGCCAACATGTTTGGGTTGCATTCCGCCGTCGCTATTCCCCTCCGCAGTGTCTACACTGGATCAGCCGACTTTGTGTTGGAATTTTTCTTACCCAAGAATTGCCATGACGGCGAAGAACAGAAGCAGATGCTGAATTTATTATGTATTGTGGTACAACAGGCTTGCCGGAGTTTACACGTTGACATGGACAAACAGATGGAGGAAGAATTCACTGTTACAGTTGGAGATATGTTGGCAGCGGCTTCCAAAGGCGGAGCCCAAAAAGAAGAAACTCTTGAGTTTGGGTCTTGTAATTTAGAAGAAGCGTCTTCAAAAGAATCGTCATGGATTGCACATATGATGGAGGCTCAAACCCAACACAAGGGTAAAGGCGTGTCAGTGTCGTTGGAATACCTGGAAGAACCAAAACAAGAGTTCAAAGTGACAACCAACTGGGAAGCTACCCACGGGGGATTCTGCAATGGGCAGACATTTTCAGATTATGGACAAGTCCACCCGAGCTCAGCTGCATCCAGAGCGAGCTTAGAAGGTGGAGGGGAATCTTATGCTTTTAGTGGACGCCGCTCGTCAGGTGGTAGAAAATCAGGCGAGAAGAGACGAACCAAGGCCGAAAAGACCATCAGCTTGCCAATTCTTCGACAATATTTTGCAGGAAGCCTTAAAGATGCTGCCAAGAGCATCGGCGGTATGCATTCTTATTTGCGCACAATCAGTCTTGTACTTATTTATAATTCCAAGCTGAATTTATTGTGTTCAATTGCAGTGTGTCCCACGACTCTTAAAAGGATATGCAGACAACATGGAATTACCAGATGGCCTTCAAGGAAAATAAAGAAGGTAGGACACTCGTTAAGGAAACTTCAGCTTGTGATCGATTCAGTACAAGGTGCTGAGGGCGCCATTCAGATTGGTTCCTTCTATTCCAGTTTTCCAGAGTTGAGCTCCACGAATTTGTCTCAATCATCAAACATCAGCGACCATTCTAAGAAAGTGCATGCTCTTCCCGAGCATGGGTTATACAGACACGGCGGCCCAACATTAAAATCTCCACCCTCTTGTTGCAGCCAGACTTCCACCATCATCAACGATGTTTTAATGGCAGAAAACCCAGAAGCGTCGCTCAATAGAGCTCATACTCACTTGGAAGCAGAGTTGCATGAGGATACAAAGCAGCAGAAAGCTGGCGAGCATCCTAGTGAGGAGGTTTTATGTTATGAGTCCCACATTGGGGAGCCTCACAAGTAG	2448	0.4702	MEYGALIHNSSAFETLSDSAASVSEGDFLDEIFAHGCWLETTGGSYNLTQPCATNPPSLNDPDLQLHYWTSSDPNYQIYQQESEVSFPFQTETEVGKRWWIGPKANPGPSSSVKERLVLAVGYLREYTKNTNVFLQIWVPTRREGAYVLTSAHDHAPPHSSVDDPNCKTQYYRNVSKGYQLAAEDETEECRVILGKLPDQWTPTVRFFKSHEYVSYVNYAQQHYDLSGSLALPVFERGSGTCLGAVEILMTNHNINYHPQIDNVCHSLQAVDFNKSTTCQNLIAPAVKVFDELYLAALNEIVGVLTSVCKTHNLPLALTWAPCGQQGKGGCPNDNFVACLSTVDSACFVADLDLLGFQEACSEYHLLRGQGIVGTAFTTTKPCFATDITAFSKTEYPLSHHANMFGLHSAVAIPLRSVYTGSADFVLEFFLPKNCHDGEEQKQMLNLLCIVVQQACRSLHVDMDKQMEEEFTVTVGDMLAAASKGGAQKEETLEFGSCNLEEASSKESSWIAHMMEAQTQHKGKGVSVSLEYLEEPKQEFKVTTNWEATHGGFCNGQTFSDYGQVHPSSAASRASLEGGGESYAFSGRRSSGGRKSGEKRRTKAEKTISLPILRQYFAGSLKDAAKSIGGMHSYLRTISLVLIYNSKLNLLCSIAVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGAEGAIQIGSFYSSFPELSSTNLSQSSNISDHSKKVHALPEHGLYRHGGPTLKSPPSCCSQTSTIINDVLMAENPEASLNRAHTHLEAELHEDTKQQKAGEHPSEEVLCYESHIGEPHK	815

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele47g0010	815	MobiDBLite	consensus disorder prediction	581	604	-	-
	Lele47g0010	815	PANTHER	PROTEIN NLP8	57	788	IPR045012	GO:0003700
	Lele47g0010	815	ProSiteProfiles	RWP-RK domain profile.	594	701	IPR003035	-
	Lele47g0010	815	Pfam	RWP-RK domain	608	681	IPR003035	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele47g0010	Lele-ChrLele47	77548	80399	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele47g0010	10	720	NLP Transcription Factor Family	AT4G35270	44.751	0.0	590

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	RWP-RK	Lele47g0010		RWP-RK	7.1e-21	No_clan