Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0002 ATGGTAGACCAAGGGAGGCAACTGTTTGCTATTATGGAAAAATGTTATGGTTTTGCTCCAACAGCAAATCATTATGCTTGCATGGCAGATCTTCTGGGTCAAGTTGGATACTTGGAAGAAGCACTCAGGCTTGTAGAAACAATGCATATGGAACCCAATGGAGGAGTGTGGGGAGCACTTCTTGGAGCATCACATATTCATGAGAACCCAGATGTTGCTGAAATTGCTGCGAGCCATTTATTTGAATTTGAACCGGATAGCATAGGAACTATAATTTGCTTTCTAACACATGCATTGATTGGTAGATGGGATGATGTTTCAAGGGGAGATAAGATAAGGAAAGTACTAGAGGATCTTGTGGAGCGACTGAAGGCTACTGGATACTGGCCAAACCTGGGTTCTATGGCTTATGATGTTAGTGATGAAAAGAAGAAGCATATACTAATGAGTCATAGTGAAAAGCTGGCTCTAGCATATGGATTGCTGAACACAGATGCAGGCTTCAAACCCCGTTCGCCGAGCTTTACACTGCGACCTTCTACAAATGGAACACGACGAGCACGATGGATGCTTGCTTACGATGGATGCTGGCTTGCGAGAACGGAGAACATATTGCAGAGAACGACGAGGTATGATCTTGACAAATTCTTAAGGTATGATCTTGACAAATTCTTAAGTTATTCTGAATTAGGGGCAAAAACAACTCTCTGTTTTTATATTCATCGGTTCATCAACGAGAAAATTGTTCTTCCTGATAAGGTGATTGTTGGGCATGCTGCTACAAACATTCGAGATGGAGATGTTGTTCTTACATATGGAGCGTCATGTGTTGTTGAGATGACACTGTTACATGCCTATGACCTAGGGAAACAATTCCGTGTTGTGTTGCTAGACTCACGACCAAAGATTGAAGGCCAGTCCTTACTTTGTAGATTGGTGGCTAAGGCCTCAGTTGCACATATACTCATAGATGCTATTTCTTATATCATTCATGAAGTTACGCGAGTTTTTCTGGCCGCCTCTGGAGTTCTTTCTAATGGAACTGTATAA 1050 0.42 MVDQGRQLFAIMEKCYGFAPTANHYACMADLLGQVGYLEEALRLVETMHMEPNGGVWGALLGASHIHENPDVAEIAASHLFEFEPDSIGTIICFLTHALIGRWDDVSRGDKIRKVLEDLVERLKATGYWPNLGSMAYDVSDEKKKHILMSHSEKLALAYGLLNTDAGFKPRSPSFTLRPSTNGTRRARWMLAYDGCWLARTENILQRTTRYDLDKFLRYDLDKFLSYSELGAKTTLCFYIHRFINEKIVLPDKVIVGHAATNIRDGDVVLTYGASCVVEMTLLHAYDLGKQFRVVLLDSRPKIEGQSLLCRLVAKASVAHILIDAISYIIHEVTRVFLAASGVLSNGTV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0002 349 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 226 349 - -
Lele47g0002 349 Pfam DYW family of nucleic acid deaminases 127 167 IPR032867 GO:0008270
Lele47g0002 349 Pfam Initiation factor 2 subunit family 232 349 IPR000649 GO:0044237
Lele47g0002 349 Gene3D Tetratricopeptide repeat domain 1 126 IPR011990 GO:0005515
Lele47g0002 349 Gene3D - 250 349 IPR042529 -
Lele47g0002 349 SUPERFAMILY NagB/RpiA/CoA transferase-like 228 349 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0002 Lele-ChrLele47 6325 9931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0002 215 349 Eukaryotic Initiation Factors Gene Family AT5G38640 56.934 1.73e-41 151