Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1484 ATGGATTTCGCGCTCAGGAAGTCCTTCAAGTCCTATGGTTCGCTCAAGCGTTCCACCAAGCTTTCCTCTGGGGACAGCGCTGACGCTGGGCGCGAAGGAATGCCCATTCTCTTTGAACAAGATCCATCCTCTCCCGAACATAATCCTCCTCAACCCCACGCCACTCCTTCCTCCTCCATGACCTCCCCCGACAGGCCCACCTACAGCGGAGAGGTCATCGTCAAGATCGACGACAGCGACTCCAAATCCTCCAAAGCCACCTCCAGCTCCCAGGGCGAAGCCAAGGTTTGGCGGGATCTCGGCTGCGACTTCTTGAGAGAAGGTGACATCACCCCCACCAAGCATGGGCAGAGTTTCGATTTCCAGCAACCCGGCCCCAAACCCGAGGACCCTCCCTCCAGGCTCATTGGTAAATTCTTGCACAGACAGAAGCTCTCCGGCGACATGTCCCTCGATATGGATTTAGAAATGGACGAGCTCCAGCTACATGATCCTTACAAGACGTATCTACCTCCTTTCGACGAGAATGCGTCGGTGAGTTTCTCCAGGGAGATCAAAGTCTCCTTCGAAGAACCGCCTCCTAATTCCGCCGACGAACCAGGCGATTCCGTTCGACGAAGGTACAAGGATAGGCCGATTATGGAGGAATTCCCGAAACCACCACAACCACAGCAGCCCGACCGTCCCGGCTCAGCTCAGACTGTTCATCCGGTAAACGGAGACGGCGAGGTTGTGAGGTGCACGTCAAACGCGTCTTTCGAGAGGAACCTTTCGTTGCAGAGGAGGTCGGGTTTGCTCAGGGCGAAAACCATCAAATCAAGACTGATCGACCCGCCAGATGAACCCGATCGGAGATCGGGCCGGATTCAGAGATCGGGGCAGATGCTGTCGGGTTTGCAGCCGGGGAATAATAAGAAAGGGGATGAGGAGGAGGAAGACCCATTTTTGGAAGAGGATCTTCCGGATGATATAAAGAAGACCAAATTCAGCATTTGGGTTCTACTAGAATGGTTGAGTCTGATTTTAATTGTGGCGGCATTGATAACCACTCTTTGTATCCCATTCTTGAGGAGAAAGAATCTGTGGAAGCTCAAGTTATGGAAATGGGAGGTGATGGTTTTGGTTCTGATTTGTGGCAGGTTAGTTTCGGACTGGGTGATTCGAATCGCGGTGTTCTTCATCGAAAGGAATTTCCTTCTGCGTAAGAGGGTGCTGTACTTTGTTTACGGGTTGAAGAAGGCAGTTCAAAATTGCCTCTGGTTGGGCCTGGTTTTAATTGCATGGCACTCTCTATTCGATCAAAAAGTGAAAAGGGAGACAAAGAACGACTTCCTAGAATATGTGACCAAGGTGTTGATCTGCTTCTTGGTGGGGACTCTGGTGTGGCTGCTGAAAACTCTGATGGTGAAGGTTCTGGCTTCCTCGTTCCATGTGCGCACCTACTTCGACAGGATACAGGAGTCGTTATTCAATCAGTACGTGATCGAAACATTGTCGGGGCCGCCATTGGTGGAGATTCAGAGGCAGGAGGAGGAGGAGGAGGAGCAGCTGGCGGAGGAGGTGATGAAGCTTCAGGATGCAGGAATCACCATACCTCCAGATCTGAGGGCGTCGGCGTTCTCTTCTCTGAATAATAAGAGCCCGAAGGTGAACAGGAGTGGGATGCTTCTCAAGAGTCCTCAGCTAAAAAGTGGCAAGTTTTCTCGACCACTTGCCAACAAAAAATCAGACGAAGGGATACCTATTGATTACTTACATAAGTTGAATCCCAGGAATGTGTCCGCATGGAATATGAAAAGGCTCATGAATATTGTGCGACACGGTGCTCTTTCCACGCTTGACGAGCAGATCCAAGGTTTAGCCTATGAAGATGAACATATCACGCAAATCCGCAGTGAGAATGAGGCCAAAGCAGCTGCCAAAAAGATATTTCAGAATGTCACCAGGCGCGGATCCCGGTTCATTTACCTAGAGGACTTGTTGCGCTTTTTGAGAGAAGATGAAGCTGTCAAAACCTTTAGTCTATTCGAAGGAGCGCCTGATCGCGGTAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTGAACTCGTTCAGAGACAGGAGAGCACTTGCTTTGACGTTGAATGACACGAAAACGGCAGTAAACAAACTCCATCGAATGCTCAATTTTTTAGTGGCCATTGTCATTCTCATTATTTGGCTCTTAATGCTGGAAATTGCCACCAGCAAATTTCTTGTCGTCGTCAGCTCCCAGCTCGTTCTGGCCGCATTCATATTTGGAAATACCTGCAAGACCATATTCGAAGCCATAATTTTCTTATTCGTCATGCACCCTTTTGACGTCGGAGATAGATGTGAAATTGATGGCATTCAGATGATTGTGGAAGAAATGAACATACTGACAACCATATTTCTGAGATACGACAATTTGAAGGTAATGATCCCTAACAGTGTTCTTGCTACCAAGGCCATATATAATTTCTACCGGAGTCCCGACATGGGTGAAGCTGCAGAGTTCTTAGTACATTTCGGTACCCCACCCGAAAAGATCACACTCATCATAAACAAAATAAGGAGTTACATCCAAAGCAAGAAGGAGTTCTGGGATCCCTCACCAATGATAGTGTACAAGGACGTGGAGCAACTGAACATGATAAAGTTAGCAGTATGGCCAAGTCACAGAATGAACCACCAAGACATGGGCGAAAGGTTTGTGAGAAGATCCCTTCTGATTGAAGAGATGATCAAGATCTTCCGGGAGATCGATATCCAGTTCCGGCTGCTTCCCCTCGATGTTAGCGTTCGAAGCGCGCCCACCACCTCCGACCGCCTTCCTCCTAGTTGGGTCACCGCCGCATCATCACCTAATTAA 2874 0.4903 MDFALRKSFKSYGSLKRSTKLSSGDSADAGREGMPILFEQDPSSPEHNPPQPHATPSSSMTSPDRPTYSGEVIVKIDDSDSKSSKATSSSQGEAKVWRDLGCDFLREGDITPTKHGQSFDFQQPGPKPEDPPSRLIGKFLHRQKLSGDMSLDMDLEMDELQLHDPYKTYLPPFDENASVSFSREIKVSFEEPPPNSADEPGDSVRRRYKDRPIMEEFPKPPQPQQPDRPGSAQTVHPVNGDGEVVRCTSNASFERNLSLQRRSGLLRAKTIKSRLIDPPDEPDRRSGRIQRSGQMLSGLQPGNNKKGDEEEEDPFLEEDLPDDIKKTKFSIWVLLEWLSLILIVAALITTLCIPFLRRKNLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVFFIERNFLLRKRVLYFVYGLKKAVQNCLWLGLVLIAWHSLFDQKVKRETKNDFLEYVTKVLICFLVGTLVWLLKTLMVKVLASSFHVRTYFDRIQESLFNQYVIETLSGPPLVEIQRQEEEEEEQLAEEVMKLQDAGITIPPDLRASAFSSLNNKSPKVNRSGMLLKSPQLKSGKFSRPLANKKSDEGIPIDYLHKLNPRNVSAWNMKRLMNIVRHGALSTLDEQIQGLAYEDEHITQIRSENEAKAAAKKIFQNVTRRGSRFIYLEDLLRFLREDEAVKTFSLFEGAPDRGKISKSALKNWVVNSFRDRRALALTLNDTKTAVNKLHRMLNFLVAIVILIIWLLMLEIATSKFLVVVSSQLVLAAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGIQMIVEEMNILTTIFLRYDNLKVMIPNSVLATKAIYNFYRSPDMGEAAEFLVHFGTPPEKITLIINKIRSYIQSKKEFWDPSPMIVYKDVEQLNMIKLAVWPSHRMNHQDMGERFVRRSLLIEEMIKIFREIDIQFRLLPLDVSVRSAPTTSDRLPPSWVTAASSPN 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1484 957 Gene3D - 779 828 IPR023408 -
Lele46g1484 957 MobiDBLite consensus disorder prediction 1 94 - -
Lele46g1484 957 MobiDBLite consensus disorder prediction 200 216 - -
Lele46g1484 957 MobiDBLite consensus disorder prediction 106 136 - -
Lele46g1484 957 MobiDBLite consensus disorder prediction 270 317 - -
Lele46g1484 957 SUPERFAMILY Sm-like ribonucleoproteins 769 828 IPR010920 -
Lele46g1484 957 MobiDBLite consensus disorder prediction 273 288 - -
Lele46g1484 957 Coils Coil 503 527 - -
Lele46g1484 957 MobiDBLite consensus disorder prediction 937 957 - -
Lele46g1484 957 MobiDBLite consensus disorder prediction 184 243 - -
Lele46g1484 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 46 949 IPR016688 -
Lele46g1484 957 FunFam Predicted mechanosensitive ion channel 779 828 - -
Lele46g1484 957 PIRSF Memb_At2g17000 40 957 IPR016688 -
Lele46g1484 957 Pfam Mechanosensitive ion channel 721 925 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1484 Lele-ChrLele46 21492426 21495743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1484 71 957 Mechanosensitive Ion Channel Family AT1G78610 54.317 0.0 892